Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00582 and RBAM_003520

See DNA alignment / Visit BSNT_00582 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:19
# Commandline: needle
#    -asequence pep-align/BSNT_00582___nasC.1.9828.seq
#    -bsequence pep-align/RBAM_003520___nasC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00582___nasC-RBAM_003520___nasC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00582___nasC-RBAM_003520___nasC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00582___nasC
# 2: RBAM_003520___nasC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 710
# Identity:     614/710 (86.5%)
# Similarity:   662/710 (93.2%)
# Gaps:           0/710 ( 0.0%)
# Score: 3261.0
# 
#
#=======================================

BSNT_00582___      1 MTERLLRYFRDKQQDVQSEKTYDTQCPFCSMQCKMQLVEQTIVTRKKYTA     50
                     |||.:|||||||.||:||||||:||||||||||||||.|||...||||||
RBAM_003520__      1 MTEPMLRYFRDKLQDIQSEKTYETQCPFCSMQCKMQLTEQTFAARKKYTA     50

BSNT_00582___     51 IGIDNPTTQGRLCMKGMNAHQHALNSSRITRPLLKKNGEFMPVSWEEALN    100
                     ||||||||.||||.|||||||||::|||||||||||||||:||||.||||
RBAM_003520__     51 IGIDNPTTHGRLCTKGMNAHQHAVHSSRITRPLLKKNGEFVPVSWAEALN    100

BSNT_00582___    101 YIKDQVTMIQVEHGHDAMAVYGSASITNEEAYLLGKFARVGLQTKYIDYN    150
                     .||:|:.:||.|||:|||||||||||||||||||||||||||||||||||
RBAM_003520__    101 RIKEQINLIQTEHGNDAMAVYGSASITNEEAYLLGKFARVGLQTKYIDYN    150

BSNT_00582___    151 GRLCMSAAATAANQTFGADRGLTNPLSDIPHTRVIILAGTNIAECQPTIM    200
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
RBAM_003520__    151 GRLCMSAAATAAGQTFGADRGLTNPLSDIPHTRVIILAGTNIAECQPTIM    200

BSNT_00582___    201 PYFEKAKENGAYIIAIDPRETATTKIADLHLKIKPGTDAALANGLVKIII    250
                     |||:||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_003520__    201 PYFDKAKENGAYIIAIDPRETATTKIADLHLKIKPGTDAALANGLVKICI    250

BSNT_00582___    251 DEQLINEDFIQSRTNGFEELKQHTDSLDLNDIAEQTSVPLADIRKAAVKF    300
                     ||||.::|||::|||||.:||:|.|:|||.:|:|||||||..||||||||
RBAM_003520__    251 DEQLTDKDFIRTRTNGFNKLKRHIDALDLKEISEQTSVPLEHIRKAAVKF    300

BSNT_00582___    301 AKETSGMLFTARGIEQQTDGTAAVKGFLNMVLITGKIGTPYSGYGAITGQ    350
                     |||||||||||||||||||||||||.||||||||||||.|:|||||||||
RBAM_003520__    301 AKETSGMLFTARGIEQQTDGTAAVKAFLNMVLITGKIGKPFSGYGAITGQ    350

BSNT_00582___    351 GNGQGAREHGQKADQLPGYRSIENEQHRAHVAKVWGIHQDDLPRKGVSAY    400
                     |||||||||||||||||||||||.|:|||::|||||||||:|||||||||
RBAM_003520__    351 GNGQGAREHGQKADQLPGYRSIEIEEHRAYIAKVWGIHQDELPRKGVSAY    400

BSNT_00582___    401 EMMEKINDGDIKGLFLMCSNPAVSSPNANLVKKALRKLTFFVAIDLFISE    450
                     ||:|||:.||||||||||||||||.||||.||:|::||.||||:||||||
RBAM_003520__    401 EMIEKIDSGDIKGLFLMCSNPAVSGPNANFVKQAIKKLRFFVAVDLFISE    450

BSNT_00582___    451 TAKYADVILPASSYLEDEGTMTNVEGRVTLRETSRPCPGEAKHDWQIICD    500
                     ||.:||||||||||||||||||||||||||||.||.||||||||||||||
RBAM_003520__    451 TAAFADVILPASSYLEDEGTMTNVEGRVTLREASRTCPGEAKHDWQIICD    500

BSNT_00582___    501 LASALGKGRYFSYTSAEDIFDELREASRGGIADYSGISYGRLRREGGIHW    550
                     :|||||||.||.|||||:||:||||||||||||||||:|.||||||||.|
RBAM_003520__    501 IASALGKGHYFPYTSAEEIFNELREASRGGIADYSGITYDRLRREGGIQW    550

BSNT_00582___    551 PCPEPDHPGIGRLFTESFAHPDQKAALSVIPNEPPVPKEKPTADYPLYLT    600
                     ||||.||||.||||..||||||.:|.||||||||.||||||:|.||||||
RBAM_003520__    551 PCPEADHPGTGRLFEHSFAHPDHRAELSVIPNEPAVPKEKPSAGYPLYLT    600

BSNT_00582___    601 TGRVMSHYLTGVQTRKSAALTARHFESFIEIHPQTAATYNIEDRVLVKIE    650
                     |||||||||||||||||:||.|||||||:||||:|||.|:||||||||||
RBAM_003520__    601 TGRVMSHYLTGVQTRKSSALAARHFESFVEIHPKTAADYHIEDRVLVKIE    650

BSNT_00582___    651 SPRGSITVRSKLSEQIRKDTVFVPIHWADAQNVNDLIGEALDPACKMPGF    700
                     ||||||||||:.||::||||:||||||:|.|||||||||||||.||||||
RBAM_003520__    651 SPRGSITVRSRWSEKVRKDTLFVPIHWSDTQNVNDLIGEALDPDCKMPGF    700

BSNT_00582___    701 KVCAVRIRPI    710
                     |:|||||.||
RBAM_003520__    701 KMCAVRISPI    710


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