Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00909 and RBAM_005290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:37
# Commandline: needle
# -asequence dna-align/BSNT_00909___ydeM.1.9828.seq
# -bsequence dna-align/RBAM_005290___ydeM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00909___ydeM-RBAM_005290___ydeM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00909___ydeM-RBAM_005290___ydeM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00909___ydeM
# 2: RBAM_005290___ydeM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 431
# Identity: 329/431 (76.3%)
# Similarity: 329/431 (76.3%)
# Gaps: 10/431 ( 2.3%)
# Score: 1215.0
#
#
#=======================================
BSNT_00909___ 1 GTGAAGTTAGATGAGTTTACAATTGGCCAGGTCTTCAAAACGAAATCATT 50
.||||.||.|||||.||.||.||.||.|||||.||..||||.|||||.||
RBAM_005290__ 1 ATGAAATTGGATGAATTCACCATCGGGCAGGTTTTTCAAACTAAATCTTT 50
BSNT_00909___ 51 AAAAGTATCCAAAGATGATATTATGCGGTTTGCGG--GTGAATTTGACCC 98
..||.||.|.|||||..||||.|||...|||||.| ||| |.||||||
RBAM_005290__ 51 TGAATTAACAAAAGAGAATATAATGAATTTTGCAGAAGTG--TATGACCC 98
BSNT_00909___ 99 CCAGTATATGCATGTAGATGAAGAAAAAGCGAGTAAA--GGCAGATTTAA 146
.||.||.||||||.||.|||||||||||||.| ||| |||||||||||
RBAM_005290__ 99 ACAATACATGCATTTAAATGAAGAAAAAGCAA--AAATGGGCAGATTTAA 146
BSNT_00909___ 147 TGGAATTATCGCTTCCGGCATACAAACACTGGCCATATCTTTTAAACTTT 196
|||||||||.|||||.||.||||||||..|..|.||..|||||||.||||
RBAM_005290__ 147 TGGAATTATTGCTTCTGGAATACAAACGTTATCTATTACTTTTAAGCTTT 196
BSNT_00909___ 197 GGATTGAAGAA-GGTTTCTATGGAGACGATATTATAGCCGGAACAGAGAT 245
||||||||||| ||..|| |||.||||||||||||.||.||.||||..||
RBAM_005290__ 197 GGATTGAAGAAGGGCGTC-ATGAAGACGATATTATTGCTGGGACAGGAAT 245
BSNT_00909___ 246 GAATCATATGATATTCATAAAACCCGTATATCCGGATGATGAATTGTTTA 295
||||.||||.|.||||.||..||||||.||.||..|||||.||.||...|
RBAM_005290__ 246 GAATAATATAAAATTCCTAGCACCCGTTTACCCTAATGATAAACTGCACA 295
BSNT_00909___ 296 CAATTGTTAAGGTTCTTGATAAGCAGCCAAAGAGAAATGAATTGGGAATA 345
|.||||||||||||.|||||||..|.|||||.|.||...|...|||.|||
RBAM_005290__ 296 CTATTGTTAAGGTTATTGATAAAAAACCAAATAAAAGCCAGACGGGGATA 345
BSNT_00909___ 346 CTCACAGTATTGCTATCTACTTATAATCAAAAAGAAGTAAAAGTGTTTGA 395
||.||.||||||.|||||||.||||||||.|||||.|.||||||||||||
RBAM_005290__ 346 CTTACTGTATTGTTATCTACCTATAATCAGAAAGAGGAAAAAGTGTTTGA 395
BSNT_00909___ 396 AGGTGAGTTATCTGTATTGATCAAACGATAA 426
||||||||||||.||.||.||.|||||.|||
RBAM_005290__ 396 AGGTGAGTTATCAGTTTTAATTAAACGCTAA 426
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