Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03914 and RBAM_005750

See Amino acid alignment / Visit BSNT_03914 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence dna-align/BSNT_03914___yraB.1.9828.seq
#    -bsequence dna-align/RBAM_005750___yraB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03914___yraB-RBAM_005750___yraB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03914___yraB-RBAM_005750___yraB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03914___yraB
# 2: RBAM_005750___yraB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 432
# Identity:     299/432 (69.2%)
# Similarity:   299/432 (69.2%)
# Gaps:          36/432 ( 8.3%)
# Score: 1016.0
# 
#
#=======================================

BSNT_03914___      1 ATGAATATTGCTCAGGTGGCAAAGCAGTTTGGCCTGACAGCCGCAACACT     50
                     |||||.|||||.||||..|||||||||.|||...|..||||||||||.||
RBAM_005750__      1 ATGAAGATTGCGCAGGCTGCAAAGCAGGTTGAGTTATCAGCCGCAACGCT     50

BSNT_03914___     51 CCGATATTACGAACGTGTAGGATTAATCCCGCCTGTAAAACGAAAAAACA    100
                     ..|.|||||.|||.||.|||||.|.||.||.||.||||||||..|..|.|
RBAM_005750__     51 TAGGTATTATGAAAGTATAGGACTGATTCCTCCGGTAAAACGCGATGAAA    100

BSNT_03914___    101 GCGGCATTCGCGACTATGATGAAGAAGATATCAAATGGATTGAATTCATT    150
                     |||||||.|||||.|||||.|||||.|||.|.||.||||||.||||.||.
RBAM_005750__    101 GCGGCATCCGCGATTATGACGAAGATGATGTGAATTGGATTCAATTTATA    150

BSNT_03914___    151 AAATGCATGCGAAATGCGGGACTATCGATAGAAGCGCTAATTGAATATAC    200
                     |||||||||.|||.|||.||.||.|||||.||.|||||.|||||||||||
RBAM_005750__    151 AAATGCATGAGAAGTGCCGGGCTGTCGATTGAGGCGCTGATTGAATATAC    200

BSNT_03914___    201 AACATTATTTACCGAAGGTGACCG----TACAGTAGAAGCTCGAAAAAAT    246
                     ..|.|||||||..|||||.| |||    |||..|.|||.|.||||||||.
RBAM_005750__    201 CGCTTTATTTATTGAAGGAG-CCGATCATACGATCGAACCCCGAAAAAAC    249

BSNT_03914___    247 ATCCTGGCTGACGAACGACAG----CGGCTGATAGAGAAGCGGAAAGAAA    292
                     |||    ||||..||.||.||    .||||||..|||||.|.||..||||
RBAM_005750__    250 ATC----CTGATAAATGAAAGGAAAAGGCTGACGGAGAAACAGAGGGAAA    295

BSNT_03914___    293 TTGATGAAACAATTAAAAGATTAGACACAAAAATTAAAGATTATGATGGG    342
                     ||||||||||.||.|||.|||||.|||..||.|||.|.|||||.||    
RBAM_005750__    296 TTGATGAAACCATAAAACGATTAAACAGGAAGATTGAGGATTACGA----    341

BSNT_03914___    343 AAAT-TGCGCGAAAACGAGGCAAAACTCAAAAGCAGGCCTAAAACGGAAA    391
                     |.|| |.|..|||||.||.||.|||||.||||.|||....|||.|.|||.
RBAM_005750__    342 AGATATCCTTGAAAATGAAGCGAAACTTAAAAACAGATTGAAAGCTGAAT    391

BSNT_03914___    392 GTCTTCACGGATCAGTGGAGCAAAGAAGGTAG    423
                     ||.||      ||.|      ||.||      
RBAM_005750__    392 GTATT------TCTG------AATGA------    405


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