Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03914 and RBAM_005750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence dna-align/BSNT_03914___yraB.1.9828.seq
# -bsequence dna-align/RBAM_005750___yraB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03914___yraB-RBAM_005750___yraB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03914___yraB-RBAM_005750___yraB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03914___yraB
# 2: RBAM_005750___yraB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 432
# Identity: 299/432 (69.2%)
# Similarity: 299/432 (69.2%)
# Gaps: 36/432 ( 8.3%)
# Score: 1016.0
#
#
#=======================================
BSNT_03914___ 1 ATGAATATTGCTCAGGTGGCAAAGCAGTTTGGCCTGACAGCCGCAACACT 50
|||||.|||||.||||..|||||||||.|||...|..||||||||||.||
RBAM_005750__ 1 ATGAAGATTGCGCAGGCTGCAAAGCAGGTTGAGTTATCAGCCGCAACGCT 50
BSNT_03914___ 51 CCGATATTACGAACGTGTAGGATTAATCCCGCCTGTAAAACGAAAAAACA 100
..|.|||||.|||.||.|||||.|.||.||.||.||||||||..|..|.|
RBAM_005750__ 51 TAGGTATTATGAAAGTATAGGACTGATTCCTCCGGTAAAACGCGATGAAA 100
BSNT_03914___ 101 GCGGCATTCGCGACTATGATGAAGAAGATATCAAATGGATTGAATTCATT 150
|||||||.|||||.|||||.|||||.|||.|.||.||||||.||||.||.
RBAM_005750__ 101 GCGGCATCCGCGATTATGACGAAGATGATGTGAATTGGATTCAATTTATA 150
BSNT_03914___ 151 AAATGCATGCGAAATGCGGGACTATCGATAGAAGCGCTAATTGAATATAC 200
|||||||||.|||.|||.||.||.|||||.||.|||||.|||||||||||
RBAM_005750__ 151 AAATGCATGAGAAGTGCCGGGCTGTCGATTGAGGCGCTGATTGAATATAC 200
BSNT_03914___ 201 AACATTATTTACCGAAGGTGACCG----TACAGTAGAAGCTCGAAAAAAT 246
..|.|||||||..|||||.| ||| |||..|.|||.|.||||||||.
RBAM_005750__ 201 CGCTTTATTTATTGAAGGAG-CCGATCATACGATCGAACCCCGAAAAAAC 249
BSNT_03914___ 247 ATCCTGGCTGACGAACGACAG----CGGCTGATAGAGAAGCGGAAAGAAA 292
||| ||||..||.||.|| .||||||..|||||.|.||..||||
RBAM_005750__ 250 ATC----CTGATAAATGAAAGGAAAAGGCTGACGGAGAAACAGAGGGAAA 295
BSNT_03914___ 293 TTGATGAAACAATTAAAAGATTAGACACAAAAATTAAAGATTATGATGGG 342
||||||||||.||.|||.|||||.|||..||.|||.|.|||||.||
RBAM_005750__ 296 TTGATGAAACCATAAAACGATTAAACAGGAAGATTGAGGATTACGA---- 341
BSNT_03914___ 343 AAAT-TGCGCGAAAACGAGGCAAAACTCAAAAGCAGGCCTAAAACGGAAA 391
|.|| |.|..|||||.||.||.|||||.||||.|||....|||.|.|||.
RBAM_005750__ 342 AGATATCCTTGAAAATGAAGCGAAACTTAAAAACAGATTGAAAGCTGAAT 391
BSNT_03914___ 392 GTCTTCACGGATCAGTGGAGCAAAGAAGGTAG 423
||.|| ||.| ||.||
RBAM_005750__ 392 GTATT------TCTG------AATGA------ 405
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