Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03914 and RBAM_005750

See DNA alignment / Visit BSNT_03914 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_03914___yraB.1.9828.seq
#    -bsequence pep-align/RBAM_005750___yraB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03914___yraB-RBAM_005750___yraB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03914___yraB-RBAM_005750___yraB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03914___yraB
# 2: RBAM_005750___yraB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity:      95/141 (67.4%)
# Similarity:   111/141 (78.7%)
# Gaps:           8/141 ( 5.7%)
# Score: 467.0
# 
#
#=======================================

BSNT_03914___      1 MNIAQVAKQFGLTAATLRYYERVGLIPPVKRKNSGIRDYDEEDIKWIEFI     50
                     |.|||.|||..|:||||||||.:||||||||..||||||||:|:.||:||
RBAM_005750__      1 MKIAQAAKQVELSAATLRYYESIGLIPPVKRDESGIRDYDEDDVNWIQFI     50

BSNT_03914___     51 KCMRNAGLSIEALIEYTTLFTEG-DRTVEARKNILADERQRLIEKRKEID     99
                     ||||:||||||||||||.||.|| |.|:|.|||||.:||:||.||::|||
RBAM_005750__     51 KCMRSAGLSIEALIEYTALFIEGADHTIEPRKNILINERKRLTEKQREID    100

BSNT_03914___    100 ETIKRLDTKIKDYDGKLRENEAKLKSRPKTESLHGSVEQRR    140
                     ||||||:.||:||:..| |||||||:|.|.|.:..      
RBAM_005750__    101 ETIKRLNRKIEDYEDIL-ENEAKLKNRLKAECISE------    134


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.