Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01072 and RBAM_006660

See Amino acid alignment / Visit BSNT_01072 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence dna-align/BSNT_01072___ydjM.1.9828.seq
#    -bsequence dna-align/RBAM_006660___ydjM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01072___ydjM-RBAM_006660___ydjM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01072___ydjM-RBAM_006660___ydjM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01072___ydjM
# 2: RBAM_006660___ydjM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity:     302/373 (81.0%)
# Similarity:   302/373 (81.0%)
# Gaps:           5/373 ( 1.3%)
# Score: 1226.0
# 
#
#=======================================

BSNT_01072___      1 ATGTTGAAGAAAGTCATT-TTAGCCGCTTTTATCTTAGTAGGAAGTACTT     49
                        |||||| ||||.||| ||||||...||.||.||||.||||||.||..
RBAM_006660__      1 ---TTGAAG-AAGTTATTCTTAGCCTTATTGATTTTAGCAGGAAGCACGC     46

BSNT_01072___     50 TGGGAGCTTTTAGTTTTTCATCAGATGCCAGTGCGAAACATGTGAACGGA     99
                     |||||||..|.||||..||.||.|||||.|||||.|||.|.|||||||||
RBAM_006660__     47 TGGGAGCGATCAGTTACTCTTCTGATGCAAGTGCTAAAAAAGTGAACGGA     96

BSNT_01072___    100 AATATTACTTGGTATAACGGAGTCGGGAAAAAAGGCTCTTCAGGTAAGAA    149
                     ||||||||.||||||||.||||||||.||||||||.|||||.|||||.||
RBAM_006660__     97 AATATTACATGGTATAATGGAGTCGGTAAAAAAGGATCTTCCGGTAAAAA    146

BSNT_01072___    150 ACTTGGACATTGGGATTGTGCGACCAAAATCGGATTTGATGTTCCTAGAA    199
                     |||.||.||.||||||||.|||||.|||.|.||||||||.|||||.||||
RBAM_006660__    147 ACTGGGGCACTGGGATTGCGCGACAAAATTAGGATTTGACGTTCCGAGAA    196

BSNT_01072___    200 ACGGGACAAAAATCAGAGCTTATGCAAAAGCGAAGCCTAAAAAGGTGATT    249
                     ||||.||.|||||||||||||||||.|||.|.||.||.||||||||.||.
RBAM_006660__    197 ACGGAACGAAAATCAGAGCTTATGCGAAATCAAAACCGAAAAAGGTTATC    246

BSNT_01072___    250 ACGGTTTATAAAAATGATGTTGGCAGAATGCCTAATGCAGTGCTGGATGT    299
                     ||.||.||.|||||||||||.|||.|..||||.|||||.||..|||||||
RBAM_006660__    247 ACCGTATACAAAAATGATGTAGGCCGTCTGCCGAATGCCGTATTGGATGT    296

BSNT_01072___    300 TAGCCCTAAAGCGTTTAAAGCGCTTGGATACCCATTAAGCAAAGGTAAAG    349
                     .|||||.|||||||||||||||||.|||||.||||||||||||||.|.||
RBAM_006660__    297 CAGCCCGAAAGCGTTTAAAGCGCTCGGATATCCATTAAGCAAAGGAAGAG    346

BSNT_01072___    350 TAGCGGGGCATTACAGCTATTAA    372
                     ||.|.||.||.||||||||||||
RBAM_006660__    347 TATCCGGACACTACAGCTATTAA    369


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