Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01072 and RBAM_006660

See DNA alignment / Visit BSNT_01072 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence pep-align/BSNT_01072___ydjM.1.9828.seq
#    -bsequence pep-align/RBAM_006660___ydjM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01072___ydjM-RBAM_006660___ydjM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01072___ydjM-RBAM_006660___ydjM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01072___ydjM
# 2: RBAM_006660___ydjM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:     108/123 (87.8%)
# Similarity:   116/123 (94.3%)
# Gaps:           1/123 ( 0.8%)
# Score: 583.0
# 
#
#=======================================

BSNT_01072___      1 MLKKVILAAFILVGSTLGAFSFSSDASAKHVNGNITWYNGVGKKGSSGKK     50
                      :||:.||..||.||||||.|:|||||||.||||||||||||||||||||
RBAM_006660__      1 -MKKLFLALLILAGSTLGAISYSSDASAKKVNGNITWYNGVGKKGSSGKK     49

BSNT_01072___     51 LGHWDCATKIGFDVPRNGTKIRAYAKAKPKKVITVYKNDVGRMPNAVLDV    100
                     |||||||||:||||||||||||||||:|||||||||||||||:|||||||
RBAM_006660__     50 LGHWDCATKLGFDVPRNGTKIRAYAKSKPKKVITVYKNDVGRLPNAVLDV     99

BSNT_01072___    101 SPKAFKALGYPLSKGKVAGHYSY    123
                     |||||||||||||||:|:|||||
RBAM_006660__    100 SPKAFKALGYPLSKGRVSGHYSY    122


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