Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01224 and RBAM_007300

See Amino acid alignment / Visit BSNT_01224 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence dna-align/BSNT_01224.1.9828.seq
#    -bsequence dna-align/RBAM_007300___yetG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01224-RBAM_007300___yetG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01224-RBAM_007300___yetG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01224
# 2: RBAM_007300___yetG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 344
# Identity:     249/344 (72.4%)
# Similarity:   249/344 (72.4%)
# Gaps:          19/344 ( 5.5%)
# Score: 920.0
# 
#
#=======================================

BSNT_01224         1 ---------------ATGTTTGTACAGTTAAGAAAAATGACGGTTAAAGA     35
                                    ||||||||.||..|.|||||||||||.||.|||||
RBAM_007300__      1 TTGGAGAGCTGCCAGATGTTTGTGCAAATCAGAAAAATGACCGTAAAAGA     50

BSNT_01224        36 AGGCTTTGCAGATAAAGTCATAGAACGTTTCAGCGCTGAAGGAATCATTG     85
                     |||...|||.||.|||||.||.|||||.|||||..|.|||||..|.||||
RBAM_007300__     51 AGGACATGCCGACAAAGTAATCGAACGCTTCAGTTCAGAAGGCGTGATTG    100

BSNT_01224        86 AAAAACAAGAAGGTTTAATTGATGTGACAGTGCTTGAGAAAAACGTACGC    135
                     ||||.||.||||||||.||.||.||.||.||.||.||.|||||.||.|||
RBAM_007300__    101 AAAAGCAGGAAGGTTTGATAGACGTAACGGTCCTGGAAAAAAAAGTCCGC    150

BSNT_01224       136 CGCGGTGATGAGGAAGTTGTTGTCATGATTCGCTGGGAATCAGAGGATCG    185
                     |||||||||||.|||||.||.||..|.||.||||||||.|||||.||.|.
RBAM_007300__    151 CGCGGTGATGAAGAAGTCGTCGTGTTAATCCGCTGGGAGTCAGAAGACCA    200

BSNT_01224       186 CTGGAAGCAATGGGAAAAAAGCGATGCGCATATCGCCGGCCACAAAGCAA    235
                     .|||||.|||||||||||||||||.|.|||.|||||.|.|||||||||||
RBAM_007300__    201 TTGGAAACAATGGGAAAAAAGCGAAGAGCACATCGCGGCCCACAAAGCAA    250

BSNT_01224       236 ACAAAGGCAAACCAAAGCCTGACTATCTGATCAGCACTGAAGTGAGCATG    285
                     ||.|||||||.||.||.|||||.|||.||.|..|.||.||.||..|.|||
RBAM_007300__    251 ACCAAGGCAAGCCGAAACCTGATTATATGCTTGGGACGGATGTCGGTATG    300

BSNT_01224       286 TACCATGTACGTGCTGTCAAACAAGGGACATACA--ATCAATAA    327
                     ||.|||||..|.||.||.|||..|||  |.||||  |..|||||
RBAM_007300__    301 TATCATGTCAGAGCCGTTAAAACAGG--CGTACACGAAAAATAA    342


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