Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01224 and RBAM_007300

See DNA alignment / Visit BSNT_01224 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence pep-align/BSNT_01224.1.9828.seq
#    -bsequence pep-align/RBAM_007300___yetG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01224-RBAM_007300___yetG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01224-RBAM_007300___yetG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01224
# 2: RBAM_007300___yetG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:      87/113 (77.0%)
# Similarity:    98/113 (86.7%)
# Gaps:           5/113 ( 4.4%)
# Score: 475.0
# 
#
#=======================================

BSNT_01224         1 -----MFVQLRKMTVKEGFADKVIERFSAEGIIEKQEGLIDVTVLEKNVR     45
                          ||||:||||||||.|||||||||:||:|||||||||||||||.||
RBAM_007300__      1 MESCQMFVQIRKMTVKEGHADKVIERFSSEGVIEKQEGLIDVTVLEKKVR     50

BSNT_01224        46 RGDEEVVVMIRWESEDRWKQWEKSDAHIAGHKANKGKPKPDYLISTEVSM     95
                     ||||||||:|||||||.|||||||:.|||.||||:|||||||::.|:|.|
RBAM_007300__     51 RGDEEVVVLIRWESEDHWKQWEKSEEHIAAHKANQGKPKPDYMLGTDVGM    100

BSNT_01224        96 YHVRAVKQGTYNQ    108
                     |||||||.|.:.:
RBAM_007300__    101 YHVRAVKTGVHEK    113


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