Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03274 and RBAM_020110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:25
# Commandline: needle
# -asequence dna-align/BSNT_03274___ypeP.1.9828.seq
# -bsequence dna-align/RBAM_020110___ypeP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03274___ypeP-RBAM_020110___ypeP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03274___ypeP-RBAM_020110___ypeP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03274___ypeP
# 2: RBAM_020110___ypeP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 690
# Identity: 506/690 (73.3%)
# Similarity: 506/690 (73.3%)
# Gaps: 27/690 ( 3.9%)
# Score: 1798.5
#
#
#=======================================
BSNT_03274___ 1 ATGAAGCTCAGACCGCATTTGAAAATAGAAGCAAAAGGAACAGGATCCGT 50
|||||.||.|..|||.||.|..||||||||||||||||||||||..|.||
RBAM_020110__ 1 ATGAATCTTAAGCCGTATATCGAAATAGAAGCAAAAGGAACAGGCCCTGT 50
BSNT_03274___ 51 CTCATTTTTTAGCGAAGACTGGCTGACAGCACAGCAGGCACGTTTGCTCG 100
|.||||||||..||||||.||||||||.|..|.|.|.||.||..||||.|
RBAM_020110__ 51 CGCATTTTTTTCCGAAGATTGGCTGACCGTTCCGAAAGCGCGCATGCTTG 100
BSNT_03274___ 101 CCAGAGAACTTGGACGTTTTCCATACATGAAAGAGCTAGAGTTCGAAGAC 150
|.||||||.|..|.||.|||||.||.||.|||||..|..|.||.||.||.
RBAM_020110__ 101 CAAGAGAAGTCAGCCGCTTTCCTTATATAAAAGACATTTATTTTGAGGAT 150
BSNT_03274___ 151 GAGAAAGGCGGCAGCTGGATGCTGAAGGAATTGGAAAAGCTGACAGAGGA 200
||.|||||||..|||||||.|||.||.|||||.||||||||.||.||.||
RBAM_020110__ 151 GAAAAAGGCGTGAGCTGGACGCTTAAAGAATTAGAAAAGCTTACTGAAGA 200
BSNT_03274___ 201 GCTTGCTCAAGAGCCTGATGACATTACTGTTTATTTTGACGGCAGTTTCG 250
||||||.||.||.|||||.||||||||.||.|||||.||||||.|.||.|
RBAM_020110__ 201 GCTTGCGCACGAACCTGACGACATTACAGTGTATTTCGACGGCGGCTTTG 250
BSNT_03274___ 251 ATAAGGAGAGCGAACTGGCCGGTCTCGGGATCGTCATCTATTATTCATTG 300
|.||....||||.||..|||||.|||||.||.|||.|.||||||||..|.
RBAM_020110__ 251 ACAAAACAAGCGGACGCGCCGGACTCGGAATTGTCGTGTATTATTCTCTC 300
BSNT_03274___ 301 GGAGGAACCCGGCATCGCTTGAGAAAAAATAAAAGCTTCCGGCTGAAAAC 350
||.||.|..|||||.|||.|..|.|||||.||||||||...|||..|.||
RBAM_020110__ 301 GGCGGCAAGCGGCACCGCATACGGAAAAACAAAAGCTTAACGCTTCAGAC 350
BSNT_03274___ 351 CAATAATGAAGCTGAATACGCAGCGCTTTAT--GAAGC-AATAAGAGAAG 397
.||.|||||.||.|||||.|| |||||||| ||||| ..|||| ||||
RBAM_020110__ 351 GAACAATGAGGCCGAATATGC--CGCTTTATACGAAGCGCTTAAG-GAAG 397
BSNT_03274___ 398 T-AAGAGAGCTTGGGGCAAGCAGAAATTCAATTACAATCAAAGGGGACTC 446
| .|| ||.|||||.|||||||||||||||||.||.||.|.||||||.||
RBAM_020110__ 398 TGCAG-GAACTTGGCGCAAGCAGAAATTCAATCACGATAAGAGGGGATTC 446
BSNT_03274___ 447 GCTTGTCGTGCTGAATCAGCTTGACGGCAGCTGGCCTTGTTATGATCCAT 496
.||.|||||..||.||||||||||||||||||||||.|||||||||..|.
RBAM_020110__ 447 CCTCGTCGTTTTGCATCAGCTTGACGGCAGCTGGCCGTGTTATGATGAAA 496
BSNT_03274___ 497 CTCATAATGAATGGCTGGACAAAATAGAAGCACTCCTTGAATCGCTGAAG 546
|.||.||.|||||||||||.|||||.|||||.||.||.|||||..|.|||
RBAM_020110__ 497 CGCAAAACGAATGGCTGGATAAAATTGAAGCGCTGCTCGAATCCTTAAAG 546
BSNT_03274___ 547 CTTACTCCAACCTACGAAACAATACAACGAAAAGACAATCAGGAAGCTGA 596
||.||.||.||.||.|||.|..||.|.|||||.||.|||||.|||||.||
RBAM_020110__ 547 CTGACACCGACATATGAAGCCGTAAACCGAAAGGAAAATCAAGAAGCGGA 596
BSNT_03274___ 597 CGGCCTCGCTAAAAAAATTCTATC---CCATCA-ATTCGTAGAAAGCCAC 642
.|.|||.||.|.|||||||||.|| ||..|| ||| |||||||.|
RBAM_020110__ 597 TGACCTTGCCAGAAAAATTCTCTCGGACCGGCAGATT----GAAAGCCGC 642
BSNT_03274___ 643 ACGAAATTAGACCGTAACGGAGATGAC-GATATTGGATAA 681
|..|.||||||..|||||||||||||| ||
RBAM_020110__ 643 ATAACATTAGAAGGTAACGGAGATGACTGA---------- 672
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