Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03274 and RBAM_020110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:25
# Commandline: needle
# -asequence pep-align/BSNT_03274___ypeP.1.9828.seq
# -bsequence pep-align/RBAM_020110___ypeP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03274___ypeP-RBAM_020110___ypeP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03274___ypeP-RBAM_020110___ypeP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03274___ypeP
# 2: RBAM_020110___ypeP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 170/226 (75.2%)
# Similarity: 196/226 (86.7%)
# Gaps: 3/226 ( 1.3%)
# Score: 904.0
#
#
#=======================================
BSNT_03274___ 1 MKLRPHLKIEAKGTGSVSFFSEDWLTAQQARLLARELGRFPYMKELEFED 50
|.|:|:::|||||||.|:||||||||..:||:||||:.||||:|::.|||
RBAM_020110__ 1 MNLKPYIEIEAKGTGPVAFFSEDWLTVPKARMLAREVSRFPYIKDIYFED 50
BSNT_03274___ 51 EKGGSWMLKELEKLTEELAQEPDDITVYFDGSFDKESELAGLGIVIYYSL 100
|||.||.||||||||||||.|||||||||||.|||.|..||||||:||||
RBAM_020110__ 51 EKGVSWTLKELEKLTEELAHEPDDITVYFDGGFDKTSGRAGLGIVVYYSL 100
BSNT_03274___ 101 GGTRHRLRKNKSFRLKTNNEAEYAALYEAIREVRELGASRNSITIKGDSL 150
||.|||:|||||..|:|||||||||||||::||:|||||||||||:||||
RBAM_020110__ 101 GGKRHRIRKNKSLTLQTNNEAEYAALYEALKEVQELGASRNSITIRGDSL 150
BSNT_03274___ 151 VVLNQLDGSWPCYDPSHNEWLDKIEALLESLKLTPTYETIQRKDNQEADG 200
|||:||||||||||.:.|||||||||||||||||||||.:.||:|||||.
RBAM_020110__ 151 VVLHQLDGSWPCYDETQNEWLDKIEALLESLKLTPTYEAVNRKENQEADD 200
BSNT_03274___ 201 LAKKILSHQFVESHTKLDRNGDDDIG 226
||:||||.:.:||...|:.||||
RBAM_020110__ 201 LARKILSDRQIESRITLEGNGDD--- 223
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