Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04001 and RBAM_024680

See Amino acid alignment / Visit BSNT_04001 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:19
# Commandline: needle
#    -asequence dna-align/BSNT_04001___yrzK.1.9828.seq
#    -bsequence dna-align/RBAM_024680___yrzK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04001___yrzK-RBAM_024680___yrzK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04001___yrzK-RBAM_024680___yrzK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04001___yrzK
# 2: RBAM_024680___yrzK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 173
# Identity:     129/173 (74.6%)
# Similarity:   129/173 (74.6%)
# Gaps:           4/173 ( 2.3%)
# Score: 445.0
# 
#
#=======================================

BSNT_04001___      1 ATGAAATATCATCCAAAAATGGGACGTGCATTTCACGACGGTGAAGCGAA     50
                     |||||||||||.||||||||||||||.||..|.|||||.|..||||..||
RBAM_024680__      1 ATGAAATATCAACCAAAAATGGGACGCGCGCTGCACGATGCGGAAGGAAA     50

BSNT_04001___     51 TCTGCATTACAGCGATCA-CGCAGATCCCGATACGACTGGTTATCTTACG     99
                     ||||||.|.|||.||||| .|| |||..|||.|.|.|.||||.||||...
RBAM_024680__     51 TCTGCACTTCAGTGATCAGAGC-GATAGCGAAAAGGCGGGTTTTCTTGAA     99

BSNT_04001___    100 GAAACAGCATCTGAATTTGGTCTTATGTCCAAAGAAGCAG-CGCTGAGGA    148
                     ||.||.||..|.||.||.|||||..|.||.||||||||.| ||| .||||
RBAM_024680__    100 GAGACGGCGACGGAGTTCGGTCTCTTATCGAAAGAAGCGGTCGC-AAGGA    148

BSNT_04001___    149 AAAACAACCGGAATAAAGCTTGA    171
                     ||||||..|||||||||.|||||
RBAM_024680__    149 AAAACAGACGGAATAAAACTTGA    171


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