Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04001 and RBAM_024680

See DNA alignment / Visit BSNT_04001 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:19
# Commandline: needle
#    -asequence pep-align/BSNT_04001___yrzK.1.9828.seq
#    -bsequence pep-align/RBAM_024680___yrzK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04001___yrzK-RBAM_024680___yrzK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04001___yrzK-RBAM_024680___yrzK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04001___yrzK
# 2: RBAM_024680___yrzK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 56
# Identity:      37/56 (66.1%)
# Similarity:    43/56 (76.8%)
# Gaps:           0/56 ( 0.0%)
# Score: 205.0
# 
#
#=======================================

BSNT_04001___      1 MKYHPKMGRAFHDGEANLHYSDHADPDTTGYLTETASEFGLMSKEAALRK     50
                     |||.||||||.||.|.|||:||.:|.:..|:|.|||:||||:||||..||
RBAM_024680__      1 MKYQPKMGRALHDAEGNLHFSDQSDSEKAGFLEETATEFGLLSKEAVARK     50

BSNT_04001___     51 NNRNKA     56
                     |.|||.
RBAM_024680__     51 NRRNKT     56


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