Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04017 and RBAM_024800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence dna-align/BSNT_04017.1.9828.seq
# -bsequence dna-align/RBAM_024800___yrzE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04017-RBAM_024800___yrzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04017-RBAM_024800___yrzE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04017
# 2: RBAM_024800___yrzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity: 301/435 (69.2%)
# Similarity: 301/435 (69.2%)
# Gaps: 54/435 (12.4%)
# Score: 1120.5
#
#
#=======================================
BSNT_04017 1 ---------------------------------------ATGGAGGAAAC 11
|||||.|||||
RBAM_024800__ 1 TTGTCATATATCAGGCCGCAGGGCGGAGAGGAGATAAAAATGGAAGAAAC 50
BSNT_04017 12 GAAACAAGTTGGAAAAGGCATTCTT-TACGGCTTAATCGCCATATTTTCA 60
|||||||||.||||.|||| .|||| |||||||||.|.||.||.|||.|.
RBAM_024800__ 51 GAAACAAGTGGGAAGAGGC-GTCTTGTACGGCTTAGTGGCTATCTTTGCG 99
BSNT_04017 61 GCCATGCTCCTGACAAGTTTGGCGGTTTCACTTTTATTGACCGCAACCTC 110
|..|||||.||.||.|||||||||.||||.||||||.||||.|..|||||
RBAM_024800__ 100 GTGATGCTTCTTACGAGTTTGGCGATTTCGCTTTTACTGACAGTTACCTC 149
BSNT_04017 111 GCTGGAAGAATCATCATTTAACTGGCTGATCACAGCTATCTCATTTCTCT 160
..|||||||||||||.||.|.||||||||||||.||..|.||.|||||.|
RBAM_024800__ 150 AATGGAAGAATCATCTTTCAGCTGGCTGATCACCGCGCTTTCTTTTCTTT 199
BSNT_04017 161 CTTTATTTATCGGCGGG----TTCATTTCAGGCGGGAAAGGCAAGGAAAG 206
|||||||| ||||| ||.||.||.|||||.||||..|||||||.
RBAM_024800__ 200 CTTTATTT----GCGGGAGGTTTTATATCGGGCGGCAAAGCGAAGGAAAA 245
BSNT_04017 207 AGGCTGGATGATTGGAGCATTGACTGCCATAAGTTTTTCTCTGATTATCT 256
||||||||||||.|||||.||.||.|||.|..|||||||..|.||.||||
RBAM_024800__ 246 AGGCTGGATGATCGGAGCGTTAACCGCCGTCTGTTTTTCATTAATCATCT 295
BSNT_04017 257 TATTGTTTCAGTATTTAGGATTCGGAAAGACATTTACAGCAGAACAGCTG 306
|..|||||||.||||||||.||||||||.||.||||||.|.|..|||||.
RBAM_024800__ 296 TGCTGTTTCAATATTTAGGGTTCGGAAAAACGTTTACATCCGGTCAGCTT 345
BSNT_04017 307 ATCTTCCATCTGGGATTTTTAGGGGTGTGCATGCTGGGCGGGATTTTCGG 356
.|.||.|||||.||.|||||.||.||..|.|||||||||||.||||||||
RBAM_024800__ 346 TTGTTTCATCTCGGCTTTTTGGGAGTCAGTATGCTGGGCGGCATTTTCGG 395
BSNT_04017 357 CGTGAACATGAGGGGAAACAGGTCTTCCA-CATAA 390
.|||||..|||..||||.|||.| || |.|||
RBAM_024800__ 396 AGTGAATTTGAAAGGAAGCAGAT----CAGCGTAA 426
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