Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04017 and RBAM_024800

See DNA alignment / Visit BSNT_04017 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:22
# Commandline: needle
#    -asequence pep-align/BSNT_04017.1.9828.seq
#    -bsequence pep-align/RBAM_024800___yrzE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04017-RBAM_024800___yrzE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04017-RBAM_024800___yrzE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04017
# 2: RBAM_024800___yrzE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 142
# Identity:     105/142 (73.9%)
# Similarity:   121/142 (85.2%)
# Gaps:          14/142 ( 9.9%)
# Score: 555.0
# 
#
#=======================================

BSNT_04017         1 -------------MEETKQVGKGILYGLIAIFSAMLLTSLAVSLLLTATS     37
                                  ||||||||:|:||||:|||:.|||||||:|||||.||
RBAM_024800__      1 MSYIRPQGGEEIKMEETKQVGRGVLYGLVAIFAVMLLTSLAISLLLTVTS     50

BSNT_04017        38 LEESSFNWLITAISFLSLFIGGFISGGKGKERGWMIGALTAISFSLIILL     87
                     :|||||:|||||:||||||.||||||||.||:|||||||||:.|||||||
RBAM_024800__     51 MEESSFSWLITALSFLSLFAGGFISGGKAKEKGWMIGALTAVCFSLIILL    100

BSNT_04017        88 FQYLGFGKTFTAEQLIFHLGFLGVCMLGGIFGVNMRGNRSST    129
                     |||||||||||:.||:||||||||.|||||||||::|:||: 
RBAM_024800__    101 FQYLGFGKTFTSGQLLFHLGFLGVSMLGGIFGVNLKGSRSA-    141


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