Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04106 and RBAM_025310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:29
# Commandline: needle
# -asequence dna-align/BSNT_04106___leuD.1.9828.seq
# -bsequence dna-align/RBAM_025310___leuD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04106___leuD-RBAM_025310___leuD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04106___leuD-RBAM_025310___leuD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04106___leuD
# 2: RBAM_025310___leuD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 601
# Identity: 495/601 (82.4%)
# Similarity: 495/601 (82.4%)
# Gaps: 2/601 ( 0.3%)
# Score: 2039.0
#
#
#=======================================
BSNT_04106___ 1 ATGGAACCTTTGAAATCACATACGGGGAAAGCAGCCGTATTAAATCGGAT 50
|||||||||||.|||.||||||||||.|||||.|||||.|||||.|||||
RBAM_025310__ 1 ATGGAACCTTTAAAAACACATACGGGAAAAGCGGCCGTCTTAAACCGGAT 50
BSNT_04106___ 51 CAATGTGGATACAGACCAGATTATTCCTAAGCAATTTTTGAAGAGGATTG 100
|||.||.|||||.||||||||||||||.||.||.||||||||.||.||||
RBAM_025310__ 51 CAACGTCGATACGGACCAGATTATTCCGAAACAGTTTTTGAAAAGAATTG 100
BSNT_04106___ 101 AAAGAACAGGCTACGGGCGTTTTGCATTCTTTGACTGGAGATATGATGCG 150
||||||||||.|||||..|.||.||.||.|||||.||||||||...||.|
RBAM_025310__ 101 AAAGAACAGGATACGGCAGATTCGCGTTTTTTGATTGGAGATACCTTGAG 150
BSNT_04106___ 151 AATGGTGAACCGAACCCTGAATTTGAATTAAACCAGC-CTGTTTATCAAG 199
||.|||||.||..|.||||||||||||||||||| || ..||.|||.|||
RBAM_025310__ 151 AACGGTGAGCCTGATCCTGAATTTGAATTAAACC-GCAAAGTCTATGAAG 199
BSNT_04106___ 200 GAGCTTCCATTTTAATAGCAGGAGAAAACTTCGGCTGCGGGTCATCGCGT 249
|.||.|||||.|||||.||.|||||.||.|||||||||||.|||||.|||
RBAM_025310__ 200 GCGCGTCCATATTAATTGCCGGAGAGAATTTCGGCTGCGGATCATCCCGT 249
BSNT_04106___ 250 GAACACGCTCCGTGGGCACTTGATGATTATGGGTTTAAAATTATTATTGC 299
||.||||||||.|||||.||.||||||||.||.||.|||||.||.|||||
RBAM_025310__ 250 GAGCACGCTCCTTGGGCGCTGGATGATTACGGCTTCAAAATCATCATTGC 299
BSNT_04106___ 300 ACCGTCATTTGCTGATATTTTCCATCAGAACTGCTTTAAAAACGGTATGC 349
.|||||||||||.||||||||.|||||.|||||.||||||||||||||||
RBAM_025310__ 300 TCCGTCATTTGCCGATATTTTTCATCAAAACTGTTTTAAAAACGGTATGC 349
BSNT_04106___ 350 TTCCGATCCGCATGCCATATGACAATTGGAAACAGCTTGTCGGCCAGTAT 399
||||.|||||.|||||.|||||..|.||||||.|.||.|.|||.||.|||
RBAM_025310__ 350 TTCCCATCCGTATGCCGTATGATCAGTGGAAAAAACTCGCCGGTCAATAT 399
BSNT_04106___ 400 GAAAACCAGTCATTGCAAATGACAGTTGACCTTGAAAAGCAGCTGATTCA 449
|||||.|||||..|..|.|||||.||||||.|.|||||.|||||.|||||
RBAM_025310__ 400 GAAAATCAGTCTCTTAACATGACGGTTGACTTGGAAAACCAGCTCATTCA 449
BSNT_04106___ 450 TGATAGTGAAGGCAATCAAATTTCATTTGAAGTTGATCCGCATTGGAAAG 499
.||.||||||||.||..|.||||||||||||||.|||||.||.|||||.|
RBAM_025310__ 450 CGACAGTGAAGGAAAAGAGATTTCATTTGAAGTCGATCCTCACTGGAAGG 499
BSNT_04106___ 500 AGATGCTGATCAACGGATATGATGAAATTTCATTAACGCTGCTGCTGGAA 549
|.||||||||.|||||.|||||||||||||||||||||||.|||||||||
RBAM_025310__ 500 AAATGCTGATAAACGGCTATGATGAAATTTCATTAACGCTTCTGCTGGAA 549
BSNT_04106___ 550 GATGAAATCAAGCAATTTGAATCACAAAGAAGCTCTTGGCTTCAAGCCTG 599
||.||.||..||||.||||||||..|||||||.||.||||||||||||||
RBAM_025310__ 550 GACGACATACAGCAGTTTGAATCGAAAAGAAGTTCATGGCTTCAAGCCTG 599
BSNT_04106___ 600 A 600
|
RBAM_025310__ 600 A 600
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