Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04106 and RBAM_025310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:29
# Commandline: needle
# -asequence pep-align/BSNT_04106___leuD.1.9828.seq
# -bsequence pep-align/RBAM_025310___leuD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04106___leuD-RBAM_025310___leuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04106___leuD-RBAM_025310___leuD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04106___leuD
# 2: RBAM_025310___leuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 182/199 (91.5%)
# Similarity: 191/199 (96.0%)
# Gaps: 0/199 ( 0.0%)
# Score: 988.0
#
#
#=======================================
BSNT_04106___ 1 MEPLKSHTGKAAVLNRINVDTDQIIPKQFLKRIERTGYGRFAFFDWRYDA 50
|||||:||||||||||||||||||||||||||||||||||||||||||..
RBAM_025310__ 1 MEPLKTHTGKAAVLNRINVDTDQIIPKQFLKRIERTGYGRFAFFDWRYLE 50
BSNT_04106___ 51 NGEPNPEFELNQPVYQGASILIAGENFGCGSSREHAPWALDDYGFKIIIA 100
||||:||||||:.||:||||||||||||||||||||||||||||||||||
RBAM_025310__ 51 NGEPDPEFELNRKVYEGASILIAGENFGCGSSREHAPWALDDYGFKIIIA 100
BSNT_04106___ 101 PSFADIFHQNCFKNGMLPIRMPYDNWKQLVGQYENQSLQMTVDLEKQLIH 150
||||||||||||||||||||||||.||:|.||||||||.||||||.||||
RBAM_025310__ 101 PSFADIFHQNCFKNGMLPIRMPYDQWKKLAGQYENQSLNMTVDLENQLIH 150
BSNT_04106___ 151 DSEGNQISFEVDPHWKEMLINGYDEISLTLLLEDEIKQFESQRSSWLQA 199
||||.:||||||||||||||||||||||||||||:|:||||:|||||||
RBAM_025310__ 151 DSEGKEISFEVDPHWKEMLINGYDEISLTLLLEDDIQQFESKRSSWLQA 199
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