Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04219 and RBAM_025960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:38
# Commandline: needle
# -asequence dna-align/BSNT_04219___lytT.1.9828.seq
# -bsequence dna-align/RBAM_025960___lytT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04219___lytT-RBAM_025960___lytT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04219___lytT-RBAM_025960___lytT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04219___lytT
# 2: RBAM_025960___lytT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 747
# Identity: 556/747 (74.4%)
# Similarity: 556/747 (74.4%)
# Gaps: 33/747 ( 4.4%)
# Score: 2036.5
#
#
#=======================================
BSNT_04219___ 1 ATGCTCAGGGTGTTAATAGTTGATGATGAGATGCTGGCAAGAGATGAACT 50
|||||.|.|||||||||.|||||||||||.||||||||||||||||||.|
RBAM_025960__ 1 ATGCTGAAGGTGTTAATCGTTGATGATGAAATGCTGGCAAGAGATGAATT 50
BSNT_04219___ 51 GGCTTACTTGCTTAAGCGGGCCAATGAGGAAATGGAAATCCATGAAGCGG 100
.|||||.|||||.||.|||.|.|||||.|.||..||.||..|.|||||.|
RBAM_025960__ 51 AGCTTATTTGCTGAAACGGACGAATGAAGTAAGTGACATAAACGAAGCTG 100
BSNT_04219___ 101 AAAATATCGAATCCGCTTTTGACCAAATGATGGATCAAAAACCTGATTTG 150
|||||||.|||||||||||||||...|||||||||||||||||.|||.||
RBAM_025960__ 101 AAAATATTGAATCCGCTTTTGACAGTATGATGGATCAAAAACCGGATCTG 150
BSNT_04219___ 151 CTGTTTTTAGACGTTGATTTATCCGGAGAAAACGGTTTTGATATCGCAAA 200
||||||||.|||||||||||.||.|||||||||||.|||||.||.||.||
RBAM_025960__ 151 CTGTTTTTGGACGTTGATTTGTCAGGAGAAAACGGATTTGACATTGCCAA 200
BSNT_04219___ 201 GCGATTGAAGAAAATGAAGCATCCTCCTGCTGTTGTGTTTGCGACAGCGT 250
.||..||||.||.|||||..||||.||.||.||.||.||||||||.||||
RBAM_025960__ 201 ACGGCTGAAAAACATGAAAAATCCGCCGGCCGTCGTTTTTGCGACGGCGT 250
BSNT_04219___ 251 ATGACCAGTATGCGCTCAAAGCGTTTGAGGTGGACGCTCTTGATTATTTA 300
|||||||.|.|||..|.|||||.|||||.||.|||||.||.|||||||||
RBAM_025960__ 251 ATGACCAATTTGCTTTAAAAGCCTTTGAAGTCGACGCGCTCGATTATTTA 300
BSNT_04219___ 301 ACCAAGCCTTTCGATGAAGAAAGAATTCAGCAAACGCTGAAAAAATATAA 350
||.||||||||.||||||||||||.|.|..||.|||.|.|.|||.|.|||
RBAM_025960__ 301 ACGAAGCCTTTTGATGAAGAAAGAGTGCGCCAGACGATCAGAAAGTTTAA 350
BSNT_04219___ 351 AAAAGTCAATCGGGATATTGTAGAAACAGAG------CAAAACAGCCAT- 393
||.|||.||.|||||.|..|.|| ||| ||.|.|||||.|
RBAM_025960__ 351 AAGAGTGAAGCGGGACAGGGCAG-----GAGCCGTCTCAGAGCAGCCGTC 395
BSNT_04219___ 394 ----GCGGGCCAGCACAAGCTCGCGCTATCTGTGGGGGAATCGATTGTGA 439
||.||...|||.||.||.||..||||.|..||.|||||.|||||.|
RBAM_025960__ 396 CGCAGCCGGAGCGCATAAACTGGCTGTATCAGCCGGTGAATCTATTGTCA 445
BSNT_04219___ 440 TTGTGGATACGAAGGACATTATCTATGCGGGAACAGAAGATGGTCATGTC 489
||.|.|||||||||||||||||.|..||.||.|..||.||.||.||.||.
RBAM_025960__ 446 TTTTAGATACGAAGGACATTATTTTCGCCGGCATGGAGGACGGACACGTT 495
BSNT_04219___ 490 AATGTAAAAACCTT-----CGATCATTCTTA-TACGGTCAGCGATACACT 533
...||.|||||.|| || ||||| |.||.||| |||.||..|
RBAM_025960__ 496 TCCGTTAAAACGTTTGCCGCG-----TCTTATTCCGTTCA-CGAAACTTT 539
BSNT_04219___ 534 CGTTGTGATTGAGAAAAAGCTGCCGGATGCTGATTTTATCCGTGTCCATC 583
.|..||.|||||||||||.|||||.|||.|.|.|||..|..|.||.|| |
RBAM_025960__ 540 GGCGGTCATTGAGAAAAAACTGCCTGATACGGGTTTCTTGAGAGTGCA-C 588
BSNT_04219___ 584 GGAGC-TTTGTCGTGAATACCGAATATATTAAAGAAATTCAGCCATGGTT 632
.|.|| ||..||||||||||.||..||||||..||||||||.||.|||||
RBAM_025960__ 589 CGCGCGTTCATCGTGAATACGGAGCATATTACGGAAATTCATCCGTGGTT 638
BSNT_04219___ 633 TAATTCAACGTATAATCTGATCATGAAAGACGGATCGAAAATACCGGTCA 682
||||||.|||||.|||||.|||.|.||||||||.||.|||||.||.||||
RBAM_025960__ 639 TAATTCGACGTACAATCTTATCTTAAAAGACGGCTCTAAAATTCCCGTCA 688
BSNT_04219___ 683 GCCGGACATATGCGAAGGAATTGAAAAAGCTGCTCCATATT---TGA 726
||||.|||||.||.|||||.||.|||||||||||.|||||| |||
RBAM_025960__ 689 GCCGTACATACGCCAAGGACTTAAAAAAGCTGCTTCATATTATATGA 735
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