Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04219 and RBAM_025960

See DNA alignment / Visit BSNT_04219 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:38
# Commandline: needle
#    -asequence pep-align/BSNT_04219___lytT.1.9828.seq
#    -bsequence pep-align/RBAM_025960___lytT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04219___lytT-RBAM_025960___lytT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04219___lytT-RBAM_025960___lytT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04219___lytT
# 2: RBAM_025960___lytT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     195/244 (79.9%)
# Similarity:   219/244 (89.8%)
# Gaps:           3/244 ( 1.2%)
# Score: 999.5
# 
#
#=======================================

BSNT_04219___      1 MLRVLIVDDEMLARDELAYLLKRANEEMEIHEAENIESAFDQMMDQKPDL     50
                     ||:||||||||||||||||||||.||..:|:||||||||||.||||||||
RBAM_025960__      1 MLKVLIVDDEMLARDELAYLLKRTNEVSDINEAENIESAFDSMMDQKPDL     50

BSNT_04219___     51 LFLDVDLSGENGFDIAKRLKKMKHPPAVVFATAYDQYALKAFEVDALDYL    100
                     ||||||||||||||||||||.||:||||||||||||:|||||||||||||
RBAM_025960__     51 LFLDVDLSGENGFDIAKRLKNMKNPPAVVFATAYDQFALKAFEVDALDYL    100

BSNT_04219___    101 TKPFDEERIQQTLKKYKKVNRDI--VETEQNSHAGQHKLALSVGESIVIV    148
                     ||||||||::||::|:|:|.||.  ..:||.|.||.||||:|.||||||:
RBAM_025960__    101 TKPFDEERVRQTIRKFKRVKRDRAGAVSEQPSAAGAHKLAVSAGESIVIL    150

BSNT_04219___    149 DTKDIIYAGTEDGHVNVKTFDHSYTVSDTLVVIEKKLPDADFIRVHRSFV    198
                     ||||||:||.|||||:||||..||:|.:||.||||||||..|:||||:|:
RBAM_025960__    151 DTKDIIFAGMEDGHVSVKTFAASYSVHETLAVIEKKLPDTGFLRVHRAFI    200

BSNT_04219___    199 VNTEYIKEIQPWFNSTYNLIMKDGSKIPVSRTYAKELKKLLHI-    241
                     ||||:|.||.||||||||||:||||||||||||||:||||||| 
RBAM_025960__    201 VNTEHITEIHPWFNSTYNLILKDGSKIPVSRTYAKDLKKLLHII    244


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