Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04375 and RBAM_027130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:51
# Commandline: needle
# -asequence dna-align/BSNT_04375.1.9828.seq
# -bsequence dna-align/RBAM_027130___ytzF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04375-RBAM_027130___ytzF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04375-RBAM_027130___ytzF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04375
# 2: RBAM_027130___ytzF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 737
# Identity: 552/737 (74.9%)
# Similarity: 552/737 (74.9%)
# Gaps: 34/737 ( 4.6%)
# Score: 2038.0
#
#
#=======================================
BSNT_04375 1 ATGAGACTTGATAAGCTGCTTGCCAACAGCGGGTATGGTTCCAGAAAAGA 50
||||||||||||||||||||||||||||||||.|..||.||.||||||||
RBAM_027130__ 1 ATGAGACTTGATAAGCTGCTTGCCAACAGCGGATTCGGCTCAAGAAAAGA 50
BSNT_04375 51 AGTCAAAGCCGTTGTAAAGGCTGGAGCCGTGATGATCGACGGCAAACCTG 100
.||.|||....|.||.|||||.||.||.||.|||||.|||||..|.||.|
RBAM_027130__ 51 TGTGAAAAAAATCGTCAAGGCCGGGGCTGTCATGATTGACGGAGAGCCGG 100
BSNT_04375 101 CCAAAGATGTAAAGGCGCACGTTGATCCTGATACGCAGGAGGTGACCGTA 150
|.||||||||.||..|.||.||.|||||.||.|..|||||..|.||.|||
RBAM_027130__ 101 CGAAAGATGTGAAAACCCATGTCGATCCGGAAAAACAGGACATCACGGTA 150
BSNT_04375 151 TACGGGGAACCGGTTGATTATCGAGAGTTCATTTATCTTATGATGAATAA 200
|||||.||.||||..||.|||||.||.||.||||||.|.|||||||||||
RBAM_027130__ 151 TACGGAGAGCCGGCAGACTATCGTGAATTTATTTATGTCATGATGAATAA 200
BSNT_04375 201 ACCGCAGGGCGTGCTGTCGGCGACTGAGGACAGCCGGCAGCAAACAGTGG 250
.|||||.||.||||||||.||.||.||.||||||||.|||||.||.||||
RBAM_027130__ 201 GCCGCAAGGAGTGCTGTCCGCTACCGAAGACAGCCGCCAGCAGACGGTGG 250
BSNT_04375 251 TCGATCTGCTGACGCCGGAGGAGATGAGATTTGAGCCATTTCCAGCCGGC 300
|.||||||||||||||.||.||...|.|||||||.||.||| |||||
RBAM_027130__ 251 TTGATCTGCTGACGCCTGAAGAACAGCGATTTGAACCGTTT----CCGGC 296
BSNT_04375 301 AGG----CTTGATAAAGATACAGAGGGCTTTTTGCTGCTCACAAATGATG 346
||| ||||||||.|||||.||.|||||||||||.||.||.|||||.|
RBAM_027130__ 297 AGGACGTCTTGATAAGGATACGGAAGGCTTTTTGCTTCTGACCAATGACG 346
BSNT_04375 347 GCCAGCTCGCACATCGGCTCCTTTCTCCTAAAAAGCATGTTCCAAAAACG 396
|.||||||||.|||||.||.||||||||.|||||||||||.||.|||||.
RBAM_027130__ 347 GGCAGCTCGCTCATCGCCTGCTTTCTCCGAAAAAGCATGTGCCTAAAACA 396
BSNT_04375 397 TATGAAGTCCATTTAAAATCACAGATTTCTAGGGAAGACATC--TCCGAT 444
|||||.||||..||||..||.|...|.||...|||||||||| || ||
RBAM_027130__ 397 TATGAGGTCCGGTTAACCTCGCCTCTGTCACCGGAAGACATCGTTC--AT 444
BSNT_04375 445 TTGGAAACGGGTGTCTACATAGAGGGCGGCTATAAAACAAAGCCGGCAAG 494
.||||||..||.|||..|||.||.||.|||||||||||.|||||||||..
RBAM_027130__ 445 CTGGAAAGAGGCGTCGTCATTGAAGGAGGCTATAAAACGAAGCCGGCAGC 494
BSNT_04375 495 AGCGGAAATCAAAACA-AACGACAG--TGGCAATACCGTGATATACCTGA 541
.|..|||||||..||| ||.|.|.| || |.||.|||||..|..|||
RBAM_027130__ 495 CGTTGAAATCATTACAGAAAGCCCGGATG---AAACGGTGATTCATTTGA 541
BSNT_04375 542 CAATTACAGAAGGAAAATACCATCAGGTCAAGCAAATGGCAAAGGCAGTC 591
|.|||||||||||.|||||.||||||||.||||..|||||||||||.|||
RBAM_027130__ 542 CCATTACAGAAGGCAAATATCATCAGGTGAAGCTGATGGCAAAGGCTGTC 591
BSNT_04375 592 GGCAATGAAGTGGTTTATTTGAAGCGGCTTTCGATGGGACGC-GTTTCCC 640
||.||||||||||.|||||||||||||||||||||||| .|| |||||.|
RBAM_027130__ 592 GGAAATGAAGTGGCTTATTTGAAGCGGCTTTCGATGGG-GGCTGTTTCTC 640
BSNT_04375 641 TAGATCCCGCTCTGGCACCCGGAGAATACCGTGAGCTGACAGAGGAAGAG 690
|.||.||.|.|||...|||.|||||||.|||.||||||||.||.||.|||
RBAM_027130__ 641 TTGACCCGGATCTTAAACCGGGAGAATTCCGCGAGCTGACTGAAGAGGAG 690
BSNT_04375 691 CTTCATTTGCTCAATGAGCCGCAAGCATGA------- 720
||..|...|||.| |||.||| |||
RBAM_027130__ 691 CTCGAAACGCTGA--GAGGCGC-----TGAAGTGTAA 720
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