Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04375 and RBAM_027130

See DNA alignment / Visit BSNT_04375 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:51
# Commandline: needle
#    -asequence pep-align/BSNT_04375.1.9828.seq
#    -bsequence pep-align/RBAM_027130___ytzF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04375-RBAM_027130___ytzF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04375-RBAM_027130___ytzF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04375
# 2: RBAM_027130___ytzF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     195/239 (81.6%)
# Similarity:   207/239 (86.6%)
# Gaps:           0/239 ( 0.0%)
# Score: 994.0
# 
#
#=======================================

BSNT_04375         1 MRLDKLLANSGYGSRKEVKAVVKAGAVMIDGKPAKDVKAHVDPDTQEVTV     50
                     |||||||||||:||||:||.:||||||||||:||||||.||||:.|::||
RBAM_027130__      1 MRLDKLLANSGFGSRKDVKKIVKAGAVMIDGEPAKDVKTHVDPEKQDITV     50

BSNT_04375        51 YGEPVDYREFIYLMMNKPQGVLSATEDSRQQTVVDLLTPEEMRFEPFPAG    100
                     ||||.|||||||:||||||||||||||||||||||||||||.||||||||
RBAM_027130__     51 YGEPADYREFIYVMMNKPQGVLSATEDSRQQTVVDLLTPEEQRFEPFPAG    100

BSNT_04375       101 RLDKDTEGFLLLTNDGQLAHRLLSPKKHVPKTYEVHLKSQISREDISDLE    150
                     |||||||||||||||||||||||||||||||||||.|.|.:|.|||..||
RBAM_027130__    101 RLDKDTEGFLLLTNDGQLAHRLLSPKKHVPKTYEVRLTSPLSPEDIVHLE    150

BSNT_04375       151 TGVYIEGGYKTKPARAEIKTNDSGNTVIYLTITEGKYHQVKQMAKAVGNE    200
                     .||.||||||||||..||.|.....|||:||||||||||||.||||||||
RBAM_027130__    151 RGVVIEGGYKTKPAAVEIITESPDETVIHLTITEGKYHQVKLMAKAVGNE    200

BSNT_04375       201 VVYLKRLSMGRVSLDPALAPGEYRELTEEELHLLNEPQA    239
                     |.||||||||.|||||.|.|||:||||||||..|...:.
RBAM_027130__    201 VAYLKRLSMGAVSLDPDLKPGEFRELTEEELETLRGAEV    239


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