Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04439 and RBAM_027410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:55
# Commandline: needle
# -asequence dna-align/BSNT_04439___ytzC.1.9828.seq
# -bsequence dna-align/RBAM_027410___ytzC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04439___ytzC-RBAM_027410___ytzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04439___ytzC-RBAM_027410___ytzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04439___ytzC
# 2: RBAM_027410___ytzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity: 207/283 (73.1%)
# Similarity: 207/283 (73.1%)
# Gaps: 20/283 ( 7.1%)
# Score: 745.5
#
#
#=======================================
BSNT_04439___ 1 GTGGCAACAAGACAATCAGTAGATGAACATCTCC-----AGC-AATGTAT 44
.||||||||||||||||||||||||||||||||| ||| ||
RBAM_027410__ 1 ATGGCAACAAGACAATCAGTAGATGAACATCTCCAAAGAAGCGAA----- 45
BSNT_04439___ 45 GCAGGCCTATGATTATGCTGAA-GAACAGCTGAAAATCGCTTCTAAACAA 93
|||||.|||||.|.||| ||| ||.||..|.|..|.||||||.||||||
RBAM_027410__ 46 -CAGGCGTATGAATTTGC-GAATGAGCAATTTATGACCGCTTCGAAACAA 93
BSNT_04439___ 94 GAGCATTATAACGATCAAGAATATAGTGATGCGCAAATGCAGCTTGAAGA 143
|||||||||||.|||.|.||.||.|||||.|||||||||..|||||||.|
RBAM_027410__ 94 GAGCATTATAATGATAATGAGTACAGTGAAGCGCAAATGATGCTTGAAAA 143
BSNT_04439___ 144 TGCGGTAAATGCCTTGAATAAGCTATGGCTGTCGTCAAATGATCAGCAGA 193
.|||||.||||..||.||.|||||.|...|.||..|.|||||||||||.|
RBAM_027410__ 144 CGCGGTGAATGAATTAAACAAGCTGTCATTATCTGCGAATGATCAGCAAA 193
BSNT_04439___ 194 GAGAACAGCTGTACAGAATGAGGCTTCAGCTTCAATCTTTGCAAAATAAT 243
||||.|||||.||..|||||||..|.|||||.||..|.||||||||.|||
RBAM_027410__ 194 GAGAGCAGCTTTATCGAATGAGATTGCAGCTGCAGACCTTGCAAAACAAT 243
BSNT_04439___ 244 ATGATCCTGCAGCACCCTCTTGATGTGTAG--- 273
|||||..||||||....|.||||| ||.
RBAM_027410__ 244 ATGATTTTGCAGCGTAATTTTGAT---TACTGA 273
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