Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04439 and RBAM_027410

See DNA alignment / Visit BSNT_04439 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:55
# Commandline: needle
#    -asequence pep-align/BSNT_04439___ytzC.1.9828.seq
#    -bsequence pep-align/RBAM_027410___ytzC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04439___ytzC-RBAM_027410___ytzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04439___ytzC-RBAM_027410___ytzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04439___ytzC
# 2: RBAM_027410___ytzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 90
# Identity:      69/90 (76.7%)
# Similarity:    76/90 (84.4%)
# Gaps:           0/90 ( 0.0%)
# Score: 345.0
# 
#
#=======================================

BSNT_04439___      1 MATRQSVDEHLQQCMQAYDYAEEQLKIASKQEHYNDQEYSDAQMQLEDAV     50
                     ||||||||||||:..|||::|.||...|||||||||.|||:|||.||:||
RBAM_027410__      1 MATRQSVDEHLQRSEQAYEFANEQFMTASKQEHYNDNEYSEAQMMLENAV     50

BSNT_04439___     51 NALNKLWLSSNDQQREQLYRMRLQLQSLQNNMILQHPLDV     90
                     |.||||.||:||||||||||||||||:||||||||...|.
RBAM_027410__     51 NELNKLSLSANDQQREQLYRMRLQLQTLQNNMILQRNFDY     90


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.