Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04625 and RBAM_028490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:04
# Commandline: needle
# -asequence dna-align/BSNT_04625___gspM.1.9828.seq
# -bsequence dna-align/RBAM_028490___yugI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04625___gspM-RBAM_028490___yugI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04625___gspM-RBAM_028490___yugI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04625___gspM
# 2: RBAM_028490___yugI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 357/397 (89.9%)
# Similarity: 357/397 (89.9%)
# Gaps: 8/397 ( 2.0%)
# Score: 1634.0
#
#
#=======================================
BSNT_04625___ 1 ATGGCAGCAAAATTTGAAGTGGGCAGTGTTTACACTGGTAAAGTTACAGG 50
||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_028490__ 1 ATGGCAGCAAAATTTGAAGTGGGCAGTGTTTACACTGGTAAAGTAACAGG 50
BSNT_04625___ 51 ATTACAAGCGTATGGTGCGTTTGTTGCATTAGATGAAGAAACTCAAGGTT 100
||||||||||||||||||||||||||||||||||||||||||||||||..
RBAM_028490__ 51 ATTACAAGCGTATGGTGCGTTTGTTGCATTAGATGAAGAAACTCAAGGAC 100
BSNT_04625___ 101 TAGTACACATTTCTGAAGTGACTCACGGTTTCGTAAAAGATATCAACGAG 150
|.||.||||||||||||||.||||||||||||||||||||.||.|||||.
RBAM_028490__ 101 TTGTTCACATTTCTGAAGTCACTCACGGTTTCGTAAAAGACATTAACGAA 150
BSNT_04625___ 151 CACCTTTCAGTTGGCGACGAAGTACAAGTAAAAGTACTTGCTGTTGATGA 200
||||||||..|.||.||||||||||||||||||||||||||.|||||.||
RBAM_028490__ 151 CACCTTTCTATCGGTGACGAAGTACAAGTAAAAGTACTTGCGGTTGACGA 200
BSNT_04625___ 201 AGAAAAAGGCAAAATCAGCCTTTCAATTCGTGCGACACAAGCTGCGCCTG 250
||||||||||||||||||||||||.||.||||||||.|||||.|||||||
RBAM_028490__ 201 AGAAAAAGGCAAAATCAGCCTTTCTATCCGTGCGACTCAAGCGGCGCCTG 250
BSNT_04625___ 251 AGAAAAAAGAAAGCAAACCAAGAAAACCTAAAGCTGCTCAAGTAAGC--- 297
|.|.||||||||||||||||||||||||.|||||.|||| ||||
RBAM_028490__ 251 AAAGAAAAGAAAGCAAACCAAGAAAACCGAAAGCGGCTC----AAGCTTC 296
BSNT_04625___ 298 -GAAGAAGCTTCTACACCACAAGGTTTCAACACATTAAAAGATAAGCTTG 346
||||||.|.|||.|.||.|||||||||||||||||.|||||||||||||
RBAM_028490__ 297 TGAAGAAACATCTGCTCCGCAAGGTTTCAACACATTGAAAGATAAGCTTG 346
BSNT_04625___ 347 AAGAGTGGATCGAAATGTCCAACCGCAAAGACCTTATCAAAAAATAA 393
||||||||||.|||..|||||||||||||||||||||||||||||||
RBAM_028490__ 347 AAGAGTGGATTGAACAGTCCAACCGCAAAGACCTTATCAAAAAATAA 393
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