Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04625 and RBAM_028490

See DNA alignment / Visit BSNT_04625 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence pep-align/BSNT_04625___gspM.1.9828.seq
#    -bsequence pep-align/RBAM_028490___yugI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04625___gspM-RBAM_028490___yugI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04625___gspM-RBAM_028490___yugI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04625___gspM
# 2: RBAM_028490___yugI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 130
# Identity:     124/130 (95.4%)
# Similarity:   126/130 (96.9%)
# Gaps:           0/130 ( 0.0%)
# Score: 628.0
# 
#
#=======================================

BSNT_04625___      1 MAAKFEVGSVYTGKVTGLQAYGAFVALDEETQGLVHISEVTHGFVKDINE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_028490__      1 MAAKFEVGSVYTGKVTGLQAYGAFVALDEETQGLVHISEVTHGFVKDINE     50

BSNT_04625___     51 HLSVGDEVQVKVLAVDEEKGKISLSIRATQAAPEKKESKPRKPKAAQVSE    100
                     |||:||||||||||||||||||||||||||||||:||||||||||||.||
RBAM_028490__     51 HLSIGDEVQVKVLAVDEEKGKISLSIRATQAAPERKESKPRKPKAAQASE    100

BSNT_04625___    101 EASTPQGFNTLKDKLEEWIEMSNRKDLIKK    130
                     |.|.||||||||||||||||.|||||||||
RBAM_028490__    101 ETSAPQGFNTLKDKLEEWIEQSNRKDLIKK    130


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