Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04834 and RBAM_029700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:22
# Commandline: needle
# -asequence dna-align/BSNT_04834___yurQ.1.9828.seq
# -bsequence dna-align/RBAM_029700___yurQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04834___yurQ-RBAM_029700___yurQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04834___yurQ-RBAM_029700___yurQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04834___yurQ
# 2: RBAM_029700___yurQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity: 302/375 (80.5%)
# Similarity: 302/375 (80.5%)
# Gaps: 0/375 ( 0.0%)
# Score: 1218.0
#
#
#=======================================
BSNT_04834___ 1 TTGATAAAAATTGATATACCCGCACCGAATGTCACCATCACTGAACGACA 50
|||||||||||..|..|.||.||.||..||||.|||||.||.|||||.||
RBAM_029700__ 1 TTGATAAAAATAAACCTTCCTGCTCCTGATGTAACCATTACGGAACGGCA 50
BSNT_04834___ 51 GCAGTCAGCTAATGATAACGAGCCGAAGATAAAACCGATTCACGGATTCA 100
|||||||.|....||.||.||.|||..|||.|||.|||||.||||.||||
RBAM_029700__ 51 GCAGTCACCGTCGGAGAATGAACCGGCGATTAAAGCGATTTACGGTTTCA 100
BSNT_04834___ 101 TTGACTTTCACCAGATCCCAAGGGACAAAGGCGGCATTTTTATGTTTTAC 150
||||.||||||||.||.||.||.||||||||||||||.|||||||||||.
RBAM_029700__ 101 TTGATTTTCACCAAATTCCGAGAGACAAAGGCGGCATCTTTATGTTTTAT 150
BSNT_04834___ 151 AACATTCATGACGAGCTGCTGTTTGTCGGTAAAGCCAGAAAGTTAAGACA 200
|||||||||||.|||||||||||||||||.||||||.|.||.||||||||
RBAM_029700__ 151 AACATTCATGATGAGCTGCTGTTTGTCGGGAAAGCCCGTAAATTAAGACA 200
BSNT_04834___ 201 GAGAATTAAGAAGCATTTCGAAGACACTGTTTCACCGATCAAACATCACA 250
.|||||.||.||||||||.|||||||.|||.||.||..|.||||||||||
RBAM_029700__ 201 AAGAATCAAAAAGCATTTTGAAGACAATGTGTCGCCTGTTAAACATCACA 250
BSNT_04834___ 251 GAGATGAAGTTTATAAAATTGAGGTATGTGTAGTTGATGATCCAATGGAA 300
||||.|||||.|||||||||||.||||||||.||..|||||||.||||||
RBAM_029700__ 251 GAGACGAAGTGTATAAAATTGAAGTATGTGTCGTAAATGATCCGATGGAA 300
BSNT_04834___ 301 AGAGAGATTTATGAAACATATATCATCAATACACAGCACTCGAAGTACAA 350
||.||||||||.|||||.||....||||||||.|..||.|||||.|||||
RBAM_029700__ 301 AGGGAGATTTACGAAACGTACGCGATCAATACCCTTCAGTCGAAATACAA 350
BSNT_04834___ 351 TATAGACAAGGTATTTTTTAAATAA 375
.||.||.||.|||||||.|||||||
RBAM_029700__ 351 CATTGAGAAAGTATTTTATAAATAA 375
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