Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04834 and RBAM_029700

See DNA alignment / Visit BSNT_04834 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:22
# Commandline: needle
#    -asequence pep-align/BSNT_04834___yurQ.1.9828.seq
#    -bsequence pep-align/RBAM_029700___yurQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04834___yurQ-RBAM_029700___yurQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04834___yurQ-RBAM_029700___yurQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04834___yurQ
# 2: RBAM_029700___yurQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:     107/124 (86.3%)
# Similarity:   117/124 (94.4%)
# Gaps:           0/124 ( 0.0%)
# Score: 579.0
# 
#
#=======================================

BSNT_04834___      1 MIKIDIPAPNVTITERQQSANDNEPKIKPIHGFIDFHQIPRDKGGIFMFY     50
                     ||||::|||:|||||||||.::|||.||.|:|||||||||||||||||||
RBAM_029700__      1 MIKINLPAPDVTITERQQSPSENEPAIKAIYGFIDFHQIPRDKGGIFMFY     50

BSNT_04834___     51 NIHDELLFVGKARKLRQRIKKHFEDTVSPIKHHRDEVYKIEVCVVDDPME    100
                     |||||||||||||||||||||||||.|||:|||||||||||||||:||||
RBAM_029700__     51 NIHDELLFVGKARKLRQRIKKHFEDNVSPVKHHRDEVYKIEVCVVNDPME    100

BSNT_04834___    101 REIYETYIINTQHSKYNIDKVFFK    124
                     |||||||.|||..|||||:|||:|
RBAM_029700__    101 REIYETYAINTLQSKYNIEKVFYK    124


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.