Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05101 and RBAM_030930

See Amino acid alignment / Visit BSNT_05101 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence dna-align/BSNT_05101.1.9828.seq
#    -bsequence dna-align/RBAM_030930___yvzC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05101-RBAM_030930___yvzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05101-RBAM_030930___yvzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05101
# 2: RBAM_030930___yvzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity:     151/231 (65.4%)
# Similarity:   151/231 (65.4%)
# Gaps:          45/231 (19.5%)
# Score: 615.0
# 
#
#=======================================

BSNT_05101         1 ---------------------------------------------ATGGT      5
                                                                  |||||
RBAM_030930__      1 GTGGTCGAAAAGATACAGATCAGAAGAGATTATGTGCTGCAGTATATGGT     50

BSNT_05101         6 TAATAACGATTATTCCCTTAATCAGCTTGCGCTGGAAATCGGAGTCTCAC     55
                     .|||||.||.||.||..|.||.|||||.||.|||||.||||||.|.||.|
RBAM_030930__     51 CAATAATGACTACTCGTTAAACCAGCTCGCCCTGGAGATCGGAATATCTC    100

BSNT_05101        56 CCGCCACACTGAGCCGCGTGCTGAATGGAGAAAGACGGCCGGGGCAGCTT    105
                     ||||||||||||||||.||.|||||||||||..|..|||||||.|||||.
RBAM_030930__    101 CCGCCACACTGAGCCGTGTACTGAATGGAGAGCGGAGGCCGGGCCAGCTG    150

BSNT_05101       106 GTGATCGGTAAAATGCTTCACTATTTTAATTTGAAATTTGAGGATCTTTT    155
                     ||.|||||.||||||||..|.||.|||.|..||||||||||.||||||||
RBAM_030930__    151 GTCATCGGAAAAATGCTCTATTACTTTGACATGAAATTTGAAGATCTTTT    200

BSNT_05101       156 TTACTATGATTTTATTGACAAAAGTCAATGA    186
                     ||||||.||.|||.|||||||||||||||||
RBAM_030930__    201 TTACTACGACTTTGTTGACAAAAGTCAATGA    231


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