Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05101 and RBAM_030930

See DNA alignment / Visit BSNT_05101 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence pep-align/BSNT_05101.1.9828.seq
#    -bsequence pep-align/RBAM_030930___yvzC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05101-RBAM_030930___yvzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05101-RBAM_030930___yvzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05101
# 2: RBAM_030930___yvzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 76
# Identity:      56/76 (73.7%)
# Similarity:    61/76 (80.3%)
# Gaps:          15/76 (19.7%)
# Score: 300.0
# 
#
#=======================================

BSNT_05101         1 ---------------MVNNDYSLNQLALEIGVSPATLSRVLNGERRPGQL     35
                                    ||||||||||||||||:||||||||||||||||||
RBAM_030930__      1 MVEKIQIRRDYVLQYMVNNDYSLNQLALEIGISPATLSRVLNGERRPGQL     50

BSNT_05101        36 VIGKMLHYFNLKFEDLFYYDFIDKSQ     61
                     ||||||:||::||||||||||:||||
RBAM_030930__     51 VIGKMLYYFDMKFEDLFYYDFVDKSQ     76


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.