Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05651 and RBAM_034160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:09
# Commandline: needle
# -asequence dna-align/BSNT_05651___ywkE.1.9828.seq
# -bsequence dna-align/RBAM_034160___ywkE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05651___ywkE-RBAM_034160___ywkE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05651___ywkE-RBAM_034160___ywkE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05651___ywkE
# 2: RBAM_034160___ywkE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 883
# Identity: 656/883 (74.3%)
# Similarity: 656/883 (74.3%)
# Gaps: 38/883 ( 4.3%)
# Score: 2386.5
#
#
#=======================================
BSNT_05651___ 1 ATGAAGACGATATTCGAAGCCCTGAAATGGGCTTCTTCTTATTTAACCGA 50
||||||||..|.||.||||||||.|..|||||||||||||||||||||||
RBAM_034160__ 1 ATGAAGACCGTTTTTGAAGCCCTAAGCTGGGCTTCTTCTTATTTAACCGA 50
BSNT_05651___ 51 AGCGGGAAGAGAAGAAAATGCGGCCGAGCTCCTATTGCTTTATGATACCG 100
|||||||||||||.||||.|||||||||||.||..||.|..|||||||||
RBAM_034160__ 51 AGCGGGAAGAGAAAAAAACGCGGCCGAGCTGCTGCTGTTAAATGATACCG 100
BSNT_05651___ 101 GAATGGAGAGAAGCAAGCTGCTCGCAAGCTTACAGGA-ACCGATTGGTGA 149
|||||||..|.||||||||.||||||||..|.||||| .||| |.||.||
RBAM_034160__ 101 GAATGGATCGGAGCAAGCTTCTCGCAAGTCTGCAGGAGGCCG-TCGGCGA 149
BSNT_05651___ 150 AGACGAACTGTATCGCTTTAAGCGTCACGTTGAGATGCATAAAGAGGGCG 199
.|||||.||.|||||.||.|.|||.|||||.||||||||||||||.||..
RBAM_034160__ 150 GGACGAGCTTTATCGTTTCAGGCGGCACGTGGAGATGCATAAAGAAGGTA 199
BSNT_05651___ 200 TGCCGGTTCAATACATTATAGGAAAAGAGTTTTTTTATGGACGGGAATTT 249
|.|||.|||||||.|||||.||.|||||....|||||.||..||||||||
RBAM_034160__ 200 TTCCGATTCAATATATTATCGGGAAAGAACAGTTTTACGGCAGGGAATTT 249
BSNT_05651___ 250 ATGGTGAATGATGATGTGCTGATCCCGCGGCCGGAAACTGAAGAAGTTGT 299
.|.||||||||.|||||.||.||.|||||.||||||||.||||||||.||
RBAM_034160__ 250 TTTGTGAATGACGATGTTCTCATTCCGCGTCCGGAAACGGAAGAAGTCGT 299
BSNT_05651___ 300 CTTTCATTTGCTTGAAAAATATCGGAGTGTTTTTTCTGAAGACGGCAAGC 349
|||||||.||||.||.|.|.|...|.|.|..|||||.| ||.|.|.|.||
RBAM_034160__ 300 CTTTCATCTGCTGGACAGACAGAAGCGGGCATTTTCCG-AGGCAGAACGC 348
BSNT_05651___ 350 TCGAA-GTTGTTGACGTTGGTACAGGGAGCGGCGCAATAGCCGTCACGCT 398
..||| ||..||||..|.|||||.||||||||.||.||.||.||.|||||
RBAM_034160__ 349 CTGAACGTCATTGATATCGGTACGGGGAGCGGTGCCATTGCGGTGACGCT 398
BSNT_05651___ 399 TGCGCTTGAAAACCAAAGCTTTTCTGTGTCGGCGGTC-GATATTTCGAAA 447
.||.||||||..|..|...|||||.||.||||| .|| ||||||||.|||
RBAM_034160__ 399 CGCCCTTGAATGCGGACATTTTTCAGTATCGGC-TTCGGATATTTCAAAA 447
BSNT_05651___ 448 GAGGCGCTGCAAGTCGCCTCTGCC-------AATGCAGAAAAACTCGGAG 490
||.||||||||.| ||.| |||||..||||.|||||||
RBAM_034160__ 448 GAAGCGCTGCAGG-------TGGCAGAAAGAAATGCGCAAAACCTCGGAG 490
BSNT_05651___ 491 CGAATGTGCGCTTTTATCAGGGCGATCTGCTTGA-GCCTTTTATTAAGGC 539
||.|.||..|.||||..|||||.|||||| ||.| .|||||||||....|
RBAM_034160__ 491 CGGACGTCTGTTTTTTGCAGGGAGATCTG-TTAACTCCTTTTATTTCATC 539
BSNT_05651___ 540 GGGAAAAAAAGCGGATATCATTGTCTCAAACCCGCCATATATTTCAGAGG 589
.||.||||||||||||||.|||||.||.||.|||||.||||||||.||.|
RBAM_034160__ 540 AGGGAAAAAAGCGGATATTATTGTTTCCAATCCGCCGTATATTTCTGAAG 589
BSNT_05651___ 590 AAGAAATGGCTGATTTATCGGAAATTGTCCGTTTTCATGAGCCGCTGCAC 639
||||||||||.|||||.|||||.||.||||||||.|||||||||||.||.
RBAM_034160__ 590 AAGAAATGGCGGATTTGTCGGATATCGTCCGTTTCCATGAGCCGCTTCAT 639
BSNT_05651___ 640 GCACTCACCGATGGCGGAGACGGGCTGAAATTTTATAAGCGGTTTATGGA 689
||.||.||.||.|||||.|||||..|||||||.||.||||||||||||||
RBAM_034160__ 640 GCTCTTACGGACGGCGGTGACGGTTTGAAATTCTACAAGCGGTTTATGGA 689
BSNT_05651___ 690 AGACATTCCGCTTGTTATGAAGGATAAAGTATTTGTCGTTTTTGAAATCG 739
.||..|.||.|||||.|||||.|||||||...|||||||.||||||||||
RBAM_034160__ 690 GGAGCTGCCTCTTGTCATGAAAGATAAAGCGCTTGTCGTCTTTGAAATCG 739
BSNT_05651___ 740 GCTGGAAACAGGGAGCGGCGGTCAAAGACCTGATCC-TCAAGGCATTTAA 788
|.|..||.|||||....||.||.|||||||||.||| || |..|.|||..
RBAM_034160__ 740 GATATAATCAGGGGAAAGCCGTGAAAGACCTGTTCCGTC-ATTCCTTTCC 788
BSNT_05651___ 789 GGGAGCGGAAGTGGAAGTGCTGAAAGATATTAATGGAAAAGACAGAACCA 838
|...||||||||||||||..|..|.||.||.||.|||||||||||||||.
RBAM_034160__ 789 GAATGCGGAAGTGGAAGTCGTACAGGACATCAACGGAAAAGACAGAACCG 838
BSNT_05651___ 839 TATGCGCTCTGAT----TCATAAAAATAAATAA 867
|||.|||..|.|| ||||.|
RBAM_034160__ 839 TATCCGCGGTCATTACATCATGA---------- 861
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