Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05651 and RBAM_034160

See DNA alignment / Visit BSNT_05651 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:08
# Commandline: needle
#    -asequence pep-align/BSNT_05651___ywkE.1.9828.seq
#    -bsequence pep-align/RBAM_034160___ywkE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05651___ywkE-RBAM_034160___ywkE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05651___ywkE-RBAM_034160___ywkE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05651___ywkE
# 2: RBAM_034160___ywkE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     227/288 (78.8%)
# Similarity:   252/288 (87.5%)
# Gaps:           2/288 ( 0.7%)
# Score: 1163.0
# 
#
#=======================================

BSNT_05651___      1 MKTIFEALKWASSYLTEAGREENAAELLLLYDTGMERSKLLASLQEPIGE     50
                     |||:||||.||||||||||||:||||||||.||||:||||||||||.:||
RBAM_034160__      1 MKTVFEALSWASSYLTEAGREKNAAELLLLNDTGMDRSKLLASLQEAVGE     50

BSNT_05651___     51 DELYRFKRHVEMHKEGVPVQYIIGKEFFYGREFMVNDDVLIPRPETEEVV    100
                     ||||||:|||||||||:|:|||||||.||||||.||||||||||||||||
RBAM_034160__     51 DELYRFRRHVEMHKEGIPIQYIIGKEQFYGREFFVNDDVLIPRPETEEVV    100

BSNT_05651___    101 FHLLEKYRSVFSEDGKLEVVDVGTGSGAIAVTLALENQSFSVSAVDISKE    150
                     ||||::.:..|||..:|.|:|:||||||||||||||...|||||.|||||
RBAM_034160__    101 FHLLDRQKRAFSEAERLNVIDIGTGSGAIAVTLALECGHFSVSASDISKE    150

BSNT_05651___    151 ALQVASANAEKLGANVRFYQGDLLEPFIKAGKKADIIVSNPPYISEEEMA    200
                     |||||..||:.|||:|.|.|||||.|||.:||||||||||||||||||||
RBAM_034160__    151 ALQVAERNAQNLGADVCFLQGDLLTPFISSGKKADIIVSNPPYISEEEMA    200

BSNT_05651___    201 DLSEIVRFHEPLHALTDGGDGLKFYKRFMEDIPLVMKDKVFVVFEIGWKQ    250
                     |||:||||||||||||||||||||||||||::|||||||..||||||:.|
RBAM_034160__    201 DLSDIVRFHEPLHALTDGGDGLKFYKRFMEELPLVMKDKALVVFEIGYNQ    250

BSNT_05651___    251 GAAVKDLILKAFKGAEVEVLKDINGKDRTICALIHKNK    288
                     |.|||||...:|..|||||::||||||||:.|:|..  
RBAM_034160__    251 GKAVKDLFRHSFPNAEVEVVQDINGKDRTVSAVITS--    286


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