Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00522 and RBAM_035350

See Amino acid alignment / Visit BSNT_00522 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence dna-align/BSNT_00522.1.9828.seq
#    -bsequence dna-align/RBAM_035350.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00522-RBAM_035350.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00522-RBAM_035350.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00522
# 2: RBAM_035350
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 815
# Identity:     759/815 (93.1%)
# Similarity:   759/815 (93.1%)
# Gaps:          16/815 ( 2.0%)
# Score: 3614.0
# 
#
#=======================================

BSNT_00522         1 ------------ATGACCGTGCAGGATATCTGTATTCATTTAGGTATCTC     38
                                 ||||||||.|||||||||||||||||||||||||||||
RBAM_035350        1 TTGCACAGCACAATGACCGTACAGGATATCTGTATTCATTTAGGTATCTC     50

BSNT_00522        39 TCGCTCGTCTTATTATCGTTGGAAGAAGAATCTGAAGAAAGATCATCCCA     88
                     |||..||||||||||||||||||||||||||||||.|||.||||||||||
RBAM_035350       51 TCGAGCGTCTTATTATCGTTGGAAGAAGAATCTGATGAAGGATCATCCCA    100

BSNT_00522        89 AGCGCCATTTAGAAAAACAAATCGGCACGTTGTGCCGAGAGCACCAGTAT    138
                     ||||||||||.|||||||||||||||||||||||||||||||||.|||||
RBAM_035350      101 AGCGCCATTTGGAAAAACAAATCGGCACGTTGTGCCGAGAGCACAAGTAT    150

BSNT_00522       139 CGATATGGATATCGAAAAATCACAGCTATATTAAAAAAGAGAATGTGTAT    188
                     ||||||||||||||||||||||||||.|||.|||||||||||||||||||
RBAM_035350      151 CGATATGGATATCGAAAAATCACAGCCATACTAAAAAAGAGAATGTGTAT    200

BSNT_00522       189 TAACCATAAAACGGTTCAGCGTATTATGCAGAAAAATCAGTGGCAGTGCC    238
                     ||||||||||||||||||.||||||||||||||.|||||.||||||||.|
RBAM_035350      201 TAACCATAAAACGGTTCAACGTATTATGCAGAAGAATCAATGGCAGTGTC    250

BSNT_00522       239 GGGTTAAGGTGAAAAAGCGCAAGAAGAATGGGCAGCCATATGCCGTGGTC    288
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_035350      251 GGGTTAAGGTGAAAAAGCGCAAGAAGGATGGGCAGCCATATGCCGTGGTC    300

BSNT_00522       289 GACAATATATTAGATAGGAACTTTCAGTCTGATCATCCTCTTGAAAAACT    338
                     ||.||||||||.|||.||||||||||||||||||.|||||||||||||||
RBAM_035350      301 GATAATATATTGGATCGGAACTTTCAGTCTGATCGTCCTCTTGAAAAACT    350

BSNT_00522       339 AGTAACAGACATCACGTATTTGCCTTATGGACAGAAACAATTGTACCTTT    388
                     ||||||.||||||||.||||||||||||||||||||||||||||||||||
RBAM_035350      351 AGTAACGGACATCACATATTTGCCTTATGGACAGAAACAATTGTACCTTT    400

BSNT_00522       389 CCAGTATATTGGATGTATATAATGGAGAAGTGATTGCTTTTACGATTGGA    438
                     ||||||||||.|||.||||.|||||||||||||||||||||||.|||||.
RBAM_035350      401 CCAGTATATTAGATTTATACAATGGAGAAGTGATTGCTTTTACTATTGGG    450

BSNT_00522       439 GATAAGCAGGACACAGACCTTGTCTTACACACACTTGATCAACTGCCAAC    488
                     ||||||||||||||||.|.||||||||.|||||||||||||.||.||||.
RBAM_035350      451 GATAAGCAGGACACAGCCTTTGTCTTAGACACACTTGATCAGCTACCAAT    500

BSNT_00522       489 ACTGCCTGAGAACTGCGTGTTACATAGTGACCAAGGATCTGTGTATACAT    538
                     .|||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_035350      501 GCTGCCTGAGAACTGCGTGTTACATAGTGACCAAGGTTCTGTGTATACAT    550

BSNT_00522       539 CTTACGAGTATCAGAAAGCTGTTAAAACAAAAGGCATTACCATGAGCATG    588
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
RBAM_035350      551 CTTACGAGTATCAAAAAGCTGTTAAAACAAAAGGCATTACCATGAGCATG    600

BSNT_00522       589 TCCCGCAAAGGGACACCCGCTGATAATGCCTCCATCGAATCGTTTCATTC    638
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_035350      601 TCCCGCAAAGGGACGCCCGCTGATAATGCCTCCATCGAATCGTTTCATTC    650

BSNT_00522       639 CTCACTAAAGTCTGAAACGTTCTATCTTAACAGCATTGATCGAACCACGA    688
                     |||.|||||||||||||||||||||||||||||||||||||||||.||||
RBAM_035350      651 CTCGCTAAAGTCTGAAACGTTCTATCTTAACAGCATTGATCGAACTACGA    700

BSNT_00522       689 CCGCCATCGTAGAACGCACTGTCATAGAATAC--ATTCATTATTATAACA    736
                     |.||||||||||||||||||||||||||||||  ||  ||||||||||||
RBAM_035350      701 CTGCCATCGTAGAACGCACTGTCATAGAATACGAAT--ATTATTATAACA    748

BSNT_00522       737 ATATTCGTATTCAAACGAAACTAAACAACCAATCACCGATAAATTATCGG    786
                     ||||||||||||||||.||||||||||||||||||||||||||.||||||
RBAM_035350      749 ATATTCGTATTCAAACCAAACTAAACAACCAATCACCGATAAACTATCGG    798

BSNT_00522       787 CAATTGGCTGTTTAA    801
                     |||||||||||||||
RBAM_035350      799 CAATTGGCTGTTTAA    813


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