Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00522 and RBAM_035350

See DNA alignment / Visit BSNT_00522 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence pep-align/BSNT_00522.1.9828.seq
#    -bsequence pep-align/RBAM_035350.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00522-RBAM_035350.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00522-RBAM_035350.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00522
# 2: RBAM_035350
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     254/270 (94.1%)
# Similarity:   259/270 (95.9%)
# Gaps:           4/270 ( 1.5%)
# Score: 1332.0
# 
#
#=======================================

BSNT_00522         1 ----MTVQDICIHLGISRSSYYRWKKNLKKDHPKRHLEKQIGTLCREHQY     46
                         ||||||||||||||:|||||||||.|||||||||||||||||||:|
RBAM_035350        1 MHSTMTVQDICIHLGISRASYYRWKKNLMKDHPKRHLEKQIGTLCREHKY     50

BSNT_00522        47 RYGYRKITAILKKRMCINHKTVQRIMQKNQWQCRVKVKKRKKNGQPYAVV     96
                     ||||||||||||||||||||||||||||||||||||||||||:|||||||
RBAM_035350       51 RYGYRKITAILKKRMCINHKTVQRIMQKNQWQCRVKVKKRKKDGQPYAVV    100

BSNT_00522        97 DNILDRNFQSDHPLEKLVTDITYLPYGQKQLYLSSILDVYNGEVIAFTIG    146
                     |||||||||||.||||||||||||||||||||||||||:|||||||||||
RBAM_035350      101 DNILDRNFQSDRPLEKLVTDITYLPYGQKQLYLSSILDLYNGEVIAFTIG    150

BSNT_00522       147 DKQDTDLVLHTLDQLPTLPENCVLHSDQGSVYTSYEYQKAVKTKGITMSM    196
                     |||||..||.||||||.|||||||||||||||||||||||||||||||||
RBAM_035350      151 DKQDTAFVLDTLDQLPMLPENCVLHSDQGSVYTSYEYQKAVKTKGITMSM    200

BSNT_00522       197 SRKGTPADNASIESFHSSLKSETFYLNSIDRTTTAIVERTVIEYIHYYNN    246
                     ||||||||||||||||||||||||||||||||||||||||||||.:||||
RBAM_035350      201 SRKGTPADNASIESFHSSLKSETFYLNSIDRTTTAIVERTVIEYEYYYNN    250

BSNT_00522       247 IRIQTKLNNQSPINYRQLAV    266
                     ||||||||||||||||||||
RBAM_035350      251 IRIQTKLNNQSPINYRQLAV    270


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