Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05859 and RBAM_035580

See Amino acid alignment / Visit BSNT_05859 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:22
# Commandline: needle
#    -asequence dna-align/BSNT_05859___ywbH.1.9828.seq
#    -bsequence dna-align/RBAM_035580___ywbH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05859___ywbH-RBAM_035580___ywbH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05859___ywbH-RBAM_035580___ywbH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05859___ywbH
# 2: RBAM_035580___ywbH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity:     338/387 (87.3%)
# Similarity:   338/387 (87.3%)
# Gaps:           0/387 ( 0.0%)
# Score: 1494.0
# 
#
#=======================================

BSNT_05859___      1 ATGAAAAAACTGTTGCTAACCGTTATTCAAATCGCTCTGTTATTTATATT     50
                     |||||||||.||.||||.|||||||||||||||||||||.|.||||||||
RBAM_035580__      1 ATGAAAAAATTGCTGCTTACCGTTATTCAAATCGCTCTGCTGTTTATATT     50

BSNT_05859___     51 TGCTCGGCTGATTAATTGGGTGACAGCCCTTCTTCATATAAATATTCCCG    100
                     |||.||.|||||.||||||||.||.||...||||||||||||||||||||
RBAM_035580__     51 TGCGCGTCTGATCAATTGGGTCACGGCGGCTCTTCATATAAATATTCCCG    100

BSNT_05859___    101 GCAGTATAATAGGGATTGTGATTCTTTTCACATTATTGCACTTTAACATT    150
                     ||||||||||.|||||||||||||||||||||||||||||.||.||.|||
RBAM_035580__    101 GCAGTATAATCGGGATTGTGATTCTTTTCACATTATTGCATTTCAAGATT    150

BSNT_05859___    151 ATCAAGCTTGAATGGATCGAGCTTGGTGCAACGTGGCTTCTCGGGGAGCT    200
                     |||||.|||||||||||.||||||||.|||.|.|||||.|||||.|||||
RBAM_035580__    151 ATCAAACTTGAATGGATTGAGCTTGGCGCAGCATGGCTCCTCGGTGAGCT    200

BSNT_05859___    201 GCTTTTATTTTTTATCCCGTCTGCCGTCGGAGTGATTGAATACGGAGACA    250
                     |||..|.|||||.|||||||||||||||||||||||||||||||||||.|
RBAM_035580__    201 GCTGCTGTTTTTCATCCCGTCTGCCGTCGGAGTGATTGAATACGGAGATA    250

BSNT_05859___    251 TTATGTCGAAATTTGGTGTCAGCATTCTGCTTGTTGTCATCATCAGCACG    300
                     |||||||.|||||.||.||.||||||.|.|||||.|||.||||||||||.
RBAM_035580__    251 TTATGTCTAAATTCGGCGTAAGCATTTTACTTGTCGTCGTCATCAGCACA    300

BSNT_05859___    301 TTTGTCGTGATGGTGTCTACAGGAACGCTTACACAACTCATTGCAAAGAG    350
                     ||||||||||||||.||.|||||.|||||||||||.||.||.|||||.||
RBAM_035580__    301 TTTGTCGTGATGGTTTCAACAGGTACGCTTACACAGCTGATAGCAAAAAG    350

BSNT_05859___    351 AAAGGAGAAAAAGCATACGTGTTCATCGGAATTGTAA    387
                     ||||||||||||.||.||||||||||||||||..|||
RBAM_035580__    351 AAAGGAGAAAAAACAAACGTGTTCATCGGAATCATAA    387


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