Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05859 and RBAM_035580

See DNA alignment / Visit BSNT_05859 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:22
# Commandline: needle
#    -asequence pep-align/BSNT_05859___ywbH.1.9828.seq
#    -bsequence pep-align/RBAM_035580___ywbH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05859___ywbH-RBAM_035580___ywbH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05859___ywbH-RBAM_035580___ywbH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05859___ywbH
# 2: RBAM_035580___ywbH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:     122/128 (95.3%)
# Similarity:   123/128 (96.1%)
# Gaps:           0/128 ( 0.0%)
# Score: 598.0
# 
#
#=======================================

BSNT_05859___      1 MKKLLLTVIQIALLFIFARLINWVTALLHINIPGSIIGIVILFTLLHFNI     50
                     ||||||||||||||||||||||||||.|||||||||||||||||||||.|
RBAM_035580__      1 MKKLLLTVIQIALLFIFARLINWVTAALHINIPGSIIGIVILFTLLHFKI     50

BSNT_05859___     51 IKLEWIELGATWLLGELLLFFIPSAVGVIEYGDIMSKFGVSILLVVIIST    100
                     ||||||||||.|||||||||||||||||||||||||||||||||||:|||
RBAM_035580__     51 IKLEWIELGAAWLLGELLLFFIPSAVGVIEYGDIMSKFGVSILLVVVIST    100

BSNT_05859___    101 FVVMVSTGTLTQLIAKRKEKKHTCSSEL    128
                     |||||||||||||||||||||.|||||.
RBAM_035580__    101 FVVMVSTGTLTQLIAKRKEKKQTCSSES    128


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.