Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06087 and RBAM_036630

See Amino acid alignment / Visit BSNT_06087 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:34
# Commandline: needle
#    -asequence dna-align/BSNT_06087___yxdJ.1.9828.seq
#    -bsequence dna-align/RBAM_036630___yxdJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06087___yxdJ-RBAM_036630___yxdJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06087___yxdJ-RBAM_036630___yxdJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06087___yxdJ
# 2: RBAM_036630___yxdJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 690
# Identity:     640/690 (92.8%)
# Similarity:   640/690 (92.8%)
# Gaps:           0/690 ( 0.0%)
# Score: 3000.0
# 
#
#=======================================

BSNT_06087___      1 TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATT     50
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036630__      1 ATGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATT     50

BSNT_06087___     51 GCAGAATTACCTTGAAAAATACGGATACCAAACAGTGGTCGCCGCGGATT    100
                     |||||||||||||||||||||||||||.|||||.||||.|||||..||||
RBAM_036630__     51 GCAGAATTACCTTGAAAAATACGGATATCAAACCGTGGCCGCCGATGATT    100

BSNT_06087___    101 TTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTG    150
                     |.||.||||||||||||||.|||||||||||||||||.||||||||||||
RBAM_036630__    101 TCACGGCTGTTCTTGATGTTTTTTTGCGGGAAAAGCCTGATGTGGTGCTG    150

BSNT_06087___    151 CTTGATATCAATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGAT    200
                     ||||||||||||.|||||.|.||||||||.||||||||||||||.|||||
RBAM_036630__    151 CTTGATATCAATCTGCCGTCTTATGACGGCTATTATTGGTGCCGCCAGAT    200

BSNT_06087___    201 CCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCCAGAAGCGGGG    250
                     |||||||||.||.||||||||||||||.||.||.||.|||||||||||||
RBAM_036630__    201 CCGCCAGCATTCTACAAGCCCGATCATTTTCATCTCAGCCAGAAGCGGGG    250

BSNT_06087___    251 AAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAA    300
                     ||||||||||.||.||||||||||||||.||.|||||.||||||||||||
RBAM_036630__    251 AAATGGATCAAGTAATGGCGATTGAAAACGGCGGAGATGATTATATCGAA    300

BSNT_06087___    301 AAACCGTTTTCTTATGATATTGTGCTTGCGAAAATCAAAAGCCAGATCCG    350
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_036630__    301 AAACCGTTTTCTTATGATATTGTGCTGGCGAAAATCAAAAGCCAGATCCG    350

BSNT_06087___    351 GAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT    400
                     .|||||.|||||.|||||||||||.|||||||||||||||||||||||||
RBAM_036630__    351 CAGGGCATACGGAGAGTACGCCGCCAAGCAGGGAGAGAAAGTGGTTGAAT    400

BSNT_06087___    401 ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGAT    450
                     |||||||.||.|||||||||||||||||||||||||||||.||||||||.
RBAM_036630__    401 ATGCCGGTGTGCAGCTCTTTGTGGAACGGTTTGAACTGCGCTTTCAGGAC    450

BSNT_06087___    451 GAAAAAAGCGAGCTTTCTAAAAAAGAAAGCAAGCTTTTGGAAGTGCTGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036630__    451 GAAAAAAGCGAGCTTTCTAAAAAAGAAAGCAAGCTTTTGGAAGTGCTGCT    500

BSNT_06087___    501 TGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGT    550
                     .|||||||||||||||||||||.|..|.|||||.|||||||||||.||||
RBAM_036630__    501 GGAGCGGGGAGAAAAGGTGACGGGAAGAGACCGGCTCATGGAAAAAACGT    550

BSNT_06087___    551 GGGACACCGACATATTCATCGATGATAATACACTTAACGTGTATATCACG    600
                     ||||||||||.||.|||.|||||||||||||.||||||||||||||||||
RBAM_036630__    551 GGGACACCGATATTTTCGTCGATGATAATACGCTTAACGTGTATATCACG    600

BSNT_06087___    601 CGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTTCTATTGAAGC    650
                     |||||||||||||||||||||||||||||||||||||||||.||||||.|
RBAM_036630__    601 CGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTTCCATTGAATC    650

BSNT_06087___    651 GGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA    690
                     |||||||||||||||||||||||||||||.||.|||||||
RBAM_036630__    651 GGTGCGGGGCGAAGGCTACCAGCTGAGGGGGCTGTCATGA    690


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