Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06087 and RBAM_036630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:34
# Commandline: needle
# -asequence pep-align/BSNT_06087___yxdJ.1.9828.seq
# -bsequence pep-align/RBAM_036630___yxdJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06087___yxdJ-RBAM_036630___yxdJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06087___yxdJ-RBAM_036630___yxdJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06087___yxdJ
# 2: RBAM_036630___yxdJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 221/229 (96.5%)
# Similarity: 224/229 (97.8%)
# Gaps: 0/229 ( 0.0%)
# Score: 1128.0
#
#
#=======================================
BSNT_06087___ 1 MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVL 50
|||||||||||||||||||||||||||||.|.||||||||||||||||||
RBAM_036630__ 1 MNKIMIVEDSEDIRGLLQNYLEKYGYQTVAADDFTAVLDVFLREKPDVVL 50
BSNT_06087___ 51 LDINLPAYDGYYWCRQIRQHSTSPIIFISARSGEMDQVMAIENGGDDYIE 100
||||||:|||||||||||||||||||||||||||||||||||||||||||
RBAM_036630__ 51 LDINLPSYDGYYWCRQIRQHSTSPIIFISARSGEMDQVMAIENGGDDYIE 100
BSNT_06087___ 101 KPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQD 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036630__ 101 KPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQD 150
BSNT_06087___ 151 EKSELSKKESKLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYIT 200
||||||||||||||||||||||||.||||||||||||||:||||||||||
RBAM_036630__ 151 EKSELSKKESKLLEVLLERGEKVTGRDRLMEKTWDTDIFVDDNTLNVYIT 200
BSNT_06087___ 201 RLRKKLRELNAPVSIEAVRGEGYQLRAQS 229
||||||||||||||||:|||||||||..|
RBAM_036630__ 201 RLRKKLRELNAPVSIESVRGEGYQLRGLS 229
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