Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06247 and RBAM_037800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:41
# Commandline: needle
# -asequence dna-align/BSNT_06247___yyaT.1.9828.seq
# -bsequence dna-align/RBAM_037800___yyaT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06247___yyaT-RBAM_037800___yyaT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06247___yyaT-RBAM_037800___yyaT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06247___yyaT
# 2: RBAM_037800___yyaT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 448
# Identity: 350/448 (78.1%)
# Similarity: 350/448 (78.1%)
# Gaps: 17/448 ( 3.8%)
# Score: 1379.5
#
#
#=======================================
BSNT_06247___ 1 ATGAATATAAAAAGAATAACAACTGAAGCTGATTTACATGAAGC-TTTGA 49
|||||.|||||||||||||||||.|||..||||||.||.|.||| .|||
RBAM_037800__ 1 ATGAAGATAAAAAGAATAACAACGGAAATTGATTTGCAAGCAGCGCTTG- 49
BSNT_06247___ 50 ATATTAGAAAGACGGTTTTCATTGAGGAGCAACATGTATCGGAATCCGAA 99
|.||||||||..|.||.|||||||||||.||.||.|||.|.|||.||||.
RBAM_037800__ 50 AGATTAGAAAAGCAGTATTCATTGAGGAACAGCAAGTACCTGAAGCCGAT 99
BSNT_06247___ 100 GAGTTCGATGAATTTGATACGCTCCAGGAACAATGCCAGCATGTCTTGGT 149
||.||.|||.|.||.||||||||..||||.||.|||..||||||||||||
RBAM_037800__ 100 GAATTTGATCAGTTCGATACGCTTGAGGATCAGTGCGGGCATGTCTTGGT 149
BSNT_06247___ 150 ATATCATGAGAATCAGCCTGTCGGCACGGGCCGTGTGCGCATCGTTGGCC 199
.|.||||||.||||||||||.||||||.||.||.||.|||||.||...||
RBAM_037800__ 150 TTTTCATGAAAATCAGCCTGCCGGCACAGGACGCGTCCGCATTGTAAACC 199
BSNT_06247___ 200 ATACAGCAAAGCTGGAAAGAATCTGCATCCTAAAACCTTACCGTAAGTAC 249
||||||..|||||.|||.|||||||||||||.||.||||||||.||.|||
RBAM_037800__ 200 ATACAGGCAAGCTCGAACGAATCTGCATCCTGAAGCCTTACCGCAAATAC 249
BSNT_06247___ 250 GGATTGGGGAAAGTCATCGTAAGCGGGTTAGAAGAAATCATAAAAGAAAA 299
||.|||||.|||||||||.||||||..||||||.|.||..||||||||||
RBAM_037800__ 250 GGGTTGGGCAAAGTCATCATAAGCGAATTAGAAAACATGGTAAAAGAAAA 299
BSNT_06247___ 300 AGGATTGACTGCATGTAAGCTGCATGGTCAAACACAAGCAGCAGGCTTTT 349
|||..|.||...||||||.||||||||.||||||||.||.|.||||||||
RBAM_037800__ 300 AGGCATCACCCAATGTAAACTGCATGGACAAACACATGCGGAAGGCTTTT 349
BSNT_06247___ 350 ATCAAAAACTGGGCTACCAGATTTCTTCACAGGCATTTATGGAAGACGGC 399
||||.|||||||||||.||||....|||||.||.||||||||||||||||
RBAM_037800__ 350 ATCACAAACTGGGCTATCAGACAGATTCACCGGAATTTATGGAAGACGGC 399
BSNT_06247___ 400 ATCCCTCATGTCTTGATGACAAAAGACATATCGCGGAATATAACATGA 447
|||||.|||||||||||||||||||| ||.| |||
RBAM_037800__ 400 ATCCCGCATGTCTTGATGACAAAAGA------GCTG---------TGA 432
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