Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06247 and RBAM_037800

See DNA alignment / Visit BSNT_06247 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:41
# Commandline: needle
#    -asequence pep-align/BSNT_06247___yyaT.1.9828.seq
#    -bsequence pep-align/RBAM_037800___yyaT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06247___yyaT-RBAM_037800___yyaT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06247___yyaT-RBAM_037800___yyaT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06247___yyaT
# 2: RBAM_037800___yyaT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     109/148 (73.6%)
# Similarity:   121/148 (81.8%)
# Gaps:           5/148 ( 3.4%)
# Score: 586.0
# 
#
#=======================================

BSNT_06247___      1 MNIKRITTEADLHEALNIRKTVFIEEQHVSESEEFDEFDTLQEQCQHVLV     50
                     |.|||||||.||..||.|||.||||||.|.|::|||:||||::||.||||
RBAM_037800__      1 MKIKRITTEIDLQAALEIRKAVFIEEQQVPEADEFDQFDTLEDQCGHVLV     50

BSNT_06247___     51 YHENQPVGTGRVRIVGHTAKLERICILKPYRKYGLGKVIVSGLEEIIKEK    100
                     :|||||.||||||||.||.||||||||||||||||||||:|.||.::|||
RBAM_037800__     51 FHENQPAGTGRVRIVNHTGKLERICILKPYRKYGLGKVIISELENMVKEK    100

BSNT_06247___    101 GLTACKLHGQTQAAGFYQKLGYQISSQAFMEDGIPHVLMTKDISRNIT    148
                     |:|.|||||||.|.|||.|||||..|..|||||||||||||::     
RBAM_037800__    101 GITQCKLHGQTHAEGFYHKLGYQTDSPEFMEDGIPHVLMTKEL-----    143


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.