Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06283 and RBAM_038090

See Amino acid alignment / Visit BSNT_06283 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:44
# Commandline: needle
#    -asequence dna-align/BSNT_06283___yyaA.1.9828.seq
#    -bsequence dna-align/RBAM_038090___yyaA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06283___yyaA-RBAM_038090___yyaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06283___yyaA-RBAM_038090___yyaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06283___yyaA
# 2: RBAM_038090___yyaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 856
# Identity:     730/856 (85.3%)
# Similarity:   730/856 (85.3%)
# Gaps:           8/856 ( 0.9%)
# Score: 3145.5
# 
#
#=======================================

BSNT_06283___      1 ATGAAGCATTCATTCTCTCGTTTCTTCGGGCTTGGTGAGAAGGAACAGGA     50
                     ||||||||||||||||||||||||||||||.||||||||||||||.||||
RBAM_038090__      1 ATGAAGCATTCATTCTCTCGTTTCTTCGGGTTTGGTGAGAAGGAAGAGGA     50

BSNT_06283___     51 GCCGGAGATTGCTGAACATGATACAAACAAAGAAGAGATTCTGGAAATAC    100
                     .||||||||.|||||.|||||||||||||||||||||||.||.|||||||
RBAM_038090__     51 ACCGGAGATAGCTGAGCATGATACAAACAAAGAAGAGATACTCGAAATAC    100

BSNT_06283___    101 CGGTAAATGCTATCGTTCCCAACCGTTTTCAGCCACGCACCATTTTCTCA    150
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
RBAM_038090__    101 CGGTACATGCTATCGTTCCCAACCGTTTTCAGCCACGCACCATTTTCTCA    150

BSNT_06283___    151 GATGAAAAAATCAAAGAGTTAGCAATGACCATTCATACACACGGCATTAT    200
                     |||||||||||||||||||||||||||||.||.||||||||||||||.||
RBAM_038090__    151 GATGAAAAAATCAAAGAGTTAGCAATGACTATCCATACACACGGCATCAT    200

BSNT_06283___    201 TCAGCCGATTGTTGTTAGGCATACAGAAGAAGAAGGCCAATACGAACTCA    250
                     |||||||||||||||.||.|||||||||||.|||||.|||||.||.||||
RBAM_038090__    201 TCAGCCGATTGTTGTCAGACATACAGAAGATGAAGGACAATATGAGCTCA    250

BSNT_06283___    251 TTGCAGGTGAAAGACGCTGGAGAGCGGTGCAATCGCTTGAGTGGGAAAAG    300
                     ||||.||||||||.||||||||||||||.||..|||||||.|||||.|||
RBAM_038090__    251 TTGCGGGTGAAAGGCGCTGGAGAGCGGTACAGACGCTTGAATGGGAGAAG    300

BSNT_06283___    301 ATTCCGGCAATTATTAAGGATTTTTCCGACACGGAAACCGCTTCTGTGGC    350
                     |||||.|||||||||||.||||||||.||.||||||||.||.|||||.||
RBAM_038090__    301 ATTCCCGCAATTATTAAAGATTTTTCTGATACGGAAACAGCATCTGTCGC    350

BSNT_06283___    351 GTTAATCGAGAACTTGCAGCGGGAAGAACTGTCTTCTATTGAGGAAGCGC    400
                     .||.||.||.|||.||||..||||||||.||||.||.|||||||||||.|
RBAM_038090__    351 TTTGATTGAAAACCTGCAAAGGGAAGAATTGTCCTCCATTGAGGAAGCTC    400

BSNT_06283___    401 ATGCTTATGCTAGGCTGCTTGAGCTGCATGATTTAACACAGGAGGCACTC    450
                     ||||.||.||.||||||.|.||.||.|||||||||||||||||.||..|.
RBAM_038090__    401 ATGCGTACGCAAGGCTGTTAGAACTTCATGATTTAACACAGGAAGCCTTG    450

BSNT_06283___    451 GCACAGCGCTTAGGAAAAGGGCAGTCTACAATCGCGAATAAGCTTCGGTT    500
                     ||.|||||||||||||||||.|||||.||.||.|||||.|||||.||.||
RBAM_038090__    451 GCGCAGCGCTTAGGAAAAGGCCAGTCAACGATTGCGAACAAGCTCCGATT    500

BSNT_06283___    501 ATTAAAGCTGCCTCAGCCGGTCCAAGAGGCGATTATGGAGAAGAAAATCA    550
                     .||||||||.||..|.||.|||||.||.||||||||||||||.|||||.|
RBAM_038090__    501 GTTAAAGCTCCCGGAACCCGTCCAGGATGCGATTATGGAGAAAAAAATTA    550

BSNT_06283___    551 CCGAGCGCCATGCCAGAGCGCTGATTCCGCTGAAACAGCCTGAGCTCCAA    600
                     |.||.||.|||||.|||||.|||||||||||.||||||||.|||.|.||.
RBAM_038090__    551 CGGAACGTCATGCAAGAGCACTGATTCCGCTCAAACAGCCGGAGTTTCAG    600

BSNT_06283___    601 GTCACACTGCTCACAGAGATTATTGAGAAAAGTTTAAATGTAAAGCAGAC    650
                     ||||||.||||..|.||.||.|||||||||||.|||||.||.||||||||
RBAM_038090__    601 GTCACATTGCTTGCGGAAATCATTGAGAAAAGCTTAAACGTCAAGCAGAC    650

BSNT_06283___    651 GGAAGACCGCGTGGTGAAAATGCTGGAGCA----AGGCCAGAGAAAGCCA    696
                     |||||||.|.||||||||||||||.||.||    |.||   ||||| |||
RBAM_038090__    651 GGAAGACAGAGTGGTGAAAATGCTTGAACAGAATAAGC---AGAAA-CCA    696

BSNT_06283___    697 AAGCCGAGACGCAAAGCATTCAGCAGAGATACAAGAATTGCGATGAACAC    746
                     |||||||||||||||||.||||||||.||||||||||||||||||||.||
RBAM_038090__    697 AAGCCGAGACGCAAAGCGTTCAGCAGGGATACAAGAATTGCGATGAATAC    746

BSNT_06283___    747 GATTCGCCAGTCACTATCAATGGTGGAAGACAGCGGTGTAAAATTGAATA    796
                     ||||||.||||||||.||.|||||.|||||||||||.||.|.|.||||||
RBAM_038090__    747 GATTCGTCAGTCACTGTCTATGGTAGAAGACAGCGGCGTCAGACTGAATA    796

BSNT_06283___    797 CGGAAGAAGAAGAATTTGAAGAATATATTCAATTAACGATTCGCATACCA    846
                     |.||||||||||||||.|||||.||.||.||..|.||.|||||.|||||.
RBAM_038090__    797 CTGAAGAAGAAGAATTCGAAGAGTACATCCAGCTTACCATTCGGATACCT    846

BSNT_06283___    847 AAATAG    852
                     |||||.
RBAM_038090__    847 AAATAA    852


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_06283 and RBAM_038090

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
