Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06283 and RBAM_038090
See
DNA alignment /
Visit
BSNT_06283 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:44
# Commandline: needle
# -asequence pep-align/BSNT_06283___yyaA.1.9828.seq
# -bsequence pep-align/RBAM_038090___yyaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06283___yyaA-RBAM_038090___yyaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06283___yyaA-RBAM_038090___yyaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06283___yyaA
# 2: RBAM_038090___yyaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity: 270/283 (95.4%)
# Similarity: 279/283 (98.6%)
# Gaps: 0/283 ( 0.0%)
# Score: 1365.0
#
#
#=======================================
BSNT_06283___ 1 MKHSFSRFFGLGEKEQEPEIAEHDTNKEEILEIPVNAIVPNRFQPRTIFS 50
||||||||||.||||:|||||||||||||||||||:||||||||||||||
RBAM_038090__ 1 MKHSFSRFFGFGEKEEEPEIAEHDTNKEEILEIPVHAIVPNRFQPRTIFS 50
BSNT_06283___ 51 DEKIKELAMTIHTHGIIQPIVVRHTEEEGQYELIAGERRWRAVQSLEWEK 100
||||||||||||||||||||||||||:|||||||||||||||||:|||||
RBAM_038090__ 51 DEKIKELAMTIHTHGIIQPIVVRHTEDEGQYELIAGERRWRAVQTLEWEK 100
BSNT_06283___ 101 IPAIIKDFSDTETASVALIENLQREELSSIEEAHAYARLLELHDLTQEAL 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_038090__ 101 IPAIIKDFSDTETASVALIENLQREELSSIEEAHAYARLLELHDLTQEAL 150
BSNT_06283___ 151 AQRLGKGQSTIANKLRLLKLPQPVQEAIMEKKITERHARALIPLKQPELQ 200
|||||||||||||||||||||:|||:||||||||||||||||||||||.|
RBAM_038090__ 151 AQRLGKGQSTIANKLRLLKLPEPVQDAIMEKKITERHARALIPLKQPEFQ 200
BSNT_06283___ 201 VTLLTEIIEKSLNVKQTEDRVVKMLEQGQRKPKPRRKAFSRDTRIAMNTI 250
||||.||||||||||||||||||||||.::||||||||||||||||||||
RBAM_038090__ 201 VTLLAEIIEKSLNVKQTEDRVVKMLEQNKQKPKPRRKAFSRDTRIAMNTI 250
BSNT_06283___ 251 RQSLSMVEDSGVKLNTEEEEFEEYIQLTIRIPK 283
||||||||||||:||||||||||||||||||||
RBAM_038090__ 251 RQSLSMVEDSGVRLNTEEEEFEEYIQLTIRIPK 283
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.