Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04363 and BL00040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:31
# Commandline: needle
# -asequence pep-align/BSNT_04363___amyX.1.5803.seq
# -bsequence pep-align/BL00040___amyX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04363___amyX-BL00040___amyX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04363___amyX-BL00040___amyX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04363___amyX
# 2: BL00040___amyX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 721
# Identity: 392/721 (54.4%)
# Similarity: 502/721 (69.6%)
# Gaps: 14/721 ( 1.9%)
# Score: 2021.0
#
#
#=======================================
BSNT_04363___ 1 MVSIRRSFEAYVDDMNIITVLIPAEQKEIMTPPFRLETETTD-FPLAVRE 49
|..|.|.||||:|:|..||||:|..:....:|||.||.:..: ..|:|:.
BL00040___amy 1 MPGISRPFEAYLDEMRTITVLVPKSRASSCSPPFLLEDDQGERIELSVKA 50
BSNT_04363___ 50 EYSLEAKYKYVCVSDHPVTFGKIHCVRASSGHKTDLQIGAVIRTSAFDDE 99
:..||.::|||..|...|.||::|.|.......||||||:|.|::|||..
BL00040___amy 51 QVELEEQFKYVLESSCTVPFGRVHKVCCEESVWTDLQIGSVTRSAAFDKA 100
BSNT_04363___ 100 FYYDGELGAVYTADHTVFKVWAPAATSAAVKLSHPNK-SGCTFQMTRLEK 148
|:|||.|||.|:...|:||||||.|::||:||..|:. ...||||.|.:|
BL00040___amy 101 FFYDGRLGAFYSKGSTLFKVWAPTASAAAIKLEDPDSLQTNTFQMMRRKK 150
BSNT_04363___ 149 GVYAVTVTGDLHGYEYLFCICNNSEWMETVDPYAKAVTVNGELGVVLRPD 198
||:.|||.|||:|:.||:.:..|.:.:.||||||||||.|||.||||.|:
BL00040___amy 151 GVFEVTVEGDLNGWSYLYELYVNGKPLLTVDPYAKAVTANGEKGVVLDPE 200
BSNT_04363___ 199 QMKWTAPLKPFSH-PVDAVIYETHLRDFSIHENSGMINKGKYLALTETDT 247
::|......|..| |.||||||.|:|||||||:|||.:||||:|.||..|
BL00040___amy 201 EVKVEKHRAPRLHSPCDAVIYEVHIRDFSIHEDSGMRHKGKYVAFTEDGT 250
BSNT_04363___ 248 QTANGSSSGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPLHF 297
:|:.|.|:|:||:|||||||:|:||.:|||||||..|..:||||||||||
BL00040___amy 251 ETSGGFSTGIAYLKELGVTHIEVLPFHDFAGVDELSPDQSYNWGYNPLHF 300
BSNT_04363___ 298 FAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVILDVVFNHVYKRENS 347
.||||||:.:|.:|:.|.||||.||.:||:||..||:|.|:|||||||.|
BL00040___amy 301 NAPEGSYSLDPQNPKCRITELKTMIQSLHKHGFSVIMDAVYNHVYKRETS 350
BSNT_04363___ 348 PFEKTVPGYFFRHDECGMPSNGTGVGNDIASERRMARKFIADCVVYWLEE 397
|||||||||||||:|.|.||:||||||||||||.|.||:|.|.|.|||||
BL00040___amy 351 PFEKTVPGYFFRHNEYGFPSDGTGVGNDIASERLMVRKYILDSVRYWLEE 400
BSNT_04363___ 398 YNADGFRFDLLGILDIDTVLYMKEKATKAKPGILLFGEGWDLATPLPHEQ 447
|:.||.||||:|||||:||..:...|...|||:.||||||||.|||...|
BL00040___amy 401 YDVDGIRFDLMGILDIETVRQISTLAENVKPGVPLFGEGWDLNTPLDSGQ 450
BSNT_04363___ 448 KAALANAPRMPGIGFFNDMFRDAVKGNTFHLKAVGFALGSGESAQAVMHG 497
||.|.||.::|.:|||||.||:||||:||.|...|:|||......|:.||
BL00040___amy 451 KATLQNAGKVPAVGFFNDRFRNAVKGSTFELSDRGYALGDTGKKAALQHG 500
BSNT_04363___ 498 IAGSSGWKALAPIVPEPSQSINYVESHDNHTFWDKMSFALPQENDSRKRS 547
||||.|:. :|:|||||||.||||||||||:....::.|: ||.
BL00040___amy 501 IAGSPGFL-------QPAQSINYVECHDNHTFWDKMALCFEEDADT-KRL 542
BSNT_04363___ 548 RQRLAAAIILLAQGVPFIHSGQEFFRTKQGVENSYQSSDSINQLDWDRRE 597
|||||.:|:||:|||||:|:||||.|||.|..|||:|.|.||:|||::|.
BL00040___amy 543 RQRLAVSIVLLSQGVPFLHAGQEFCRTKNGDSNSYRSGDDINKLDWEKRA 592
BSNT_04363___ 598 TFKEDVHYIRRLISLRKAHPAFRLRSAADIRRHLECLTLKEHLIAYRLYD 647
...|||.|:|:||.||::||||||:...:::.||..:.....:.||:|.:
BL00040___amy 593 ELCEDVEYVRQLIRLRRSHPAFRLQKEEEVKEHLSFMDGTGEVTAYKLKN 642
BSNT_04363___ 648 LDEVDEWKDIIVIHHASPDSVEWSLPNDIPYRLLCDPSGFQEDPAEIKKT 697
:..:|.|.:|||:|..........||:...|.|.|||..|.....:.:|.
BL00040___amy 643 IAAIDPWNEIIVVHCPFAKKETLKLPDQKQYLLHCDPFTFFNGKVQAEKR 692
BSNT_04363___ 698 VAVNGIGTVILYLASDLKSFA 718
:.:|||||.:||....:.
BL00040___amy 693 LRLNGIGTYVLYEPKGIF--- 710
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