Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00004 and BL00079

See DNA alignment / Visit BSNT_00004 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:39
# Commandline: needle
#    -asequence pep-align/BSNT_00004___recF.1.5803.seq
#    -bsequence pep-align/BL00079___recF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00004___recF-BL00079___recF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00004___recF-BL00079___recF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00004___recF
# 2: BL00079___recF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 370
# Identity:     329/370 (88.9%)
# Similarity:   352/370 (95.1%)
# Gaps:           0/370 ( 0.0%)
# Score: 1683.0
# 
#
#=======================================

BSNT_00004___      1 MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAK     50
                     ||||||.|||||||:..:||||||||||||||||||||||||||||:|||
BL00079___rec      1 MYIQNLTLSSYRNYERLDLQFENKVNVIIGENAQGKTNLMEAIYVLAMAK     50

BSNT_00004___     51 SHRTSNDKELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVNHIE    100
                     ||||||||||||||:|||||||||:|:||::|:|||||||||||||||||
BL00079___rec     51 SHRTSNDKELIRWDEDYAKIEGRVIKKNGSVPIQLVISKKGKKGKVNHIE    100

BSNT_00004___    101 QQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDL    150
                     ||||||||||:|||||||||||||||||||||||||||||||||||||||
BL00079___rec    101 QQKLSQYVGAVNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDL    150

BSNT_00004___    151 SLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFT    200
                     ||||||||||||||||||||||||:|||||||:||.|.|||||:|||||.
BL00079___rec    151 SLYQKILSQRNHFLKQLQTRKQTDQTMLDVLTEQLTEFAAKVVMKRLQFV    200

BSNT_00004___    201 AQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKIGDSYQEAFSK    250
                     .||||||||||:|||||||||||||||:|.|||..||||:.:||||.|||
BL00079___rec    201 DQLEKWAQPIHSGISRGLEELTLKYHTSLHVSDSPDLSKMINSYQETFSK    250

BSNT_00004___    251 LREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEI    300
                     ||:|||||||:|||||||||||||||||||||||||||||||||||||||
BL00079___rec    251 LRDKEIERGVSLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEI    300

BSNT_00004___    301 DLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGI    350
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BL00079___rec    301 DLIQEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGI    350

BSNT_00004___    351 DHETLRQAGMFRVQNGALVK    370
                     ||:||.:|.:|||:||.|..
BL00079___rec    351 DHKTLNEAEIFRVENGTLSD    370


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