Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05329 and BL00084
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:26
# Commandline: needle
# -asequence pep-align/BSNT_05329___nagA.1.5803.seq
# -bsequence pep-align/BL00084___nagA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05329___nagA-BL00084___nagA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05329___nagA-BL00084___nagA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05329___nagA
# 2: BL00084___nagA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity: 198/404 (49.0%)
# Similarity: 261/404 (64.6%)
# Gaps: 11/404 ( 2.7%)
# Score: 961.0
#
#
#=======================================
BSNT_05329___ 1 ----MAESLLIKDIAIVTENEVIKNGYVGINDGKISTVS--TERPKESYS 44
.::..:.|.:.|.:||.:|::|::..|..||.... .:.|..:.:
BL00084___nag 1 MKTKPSQRYIFKHLHIYSENGMIEDGFLLTNGEKIEAYGPMADIPASAQT 50
BSNT_05329___ 45 KE-IQAPADSVLLPGMIDIHIHGGYGADTMDASFSTLDIMSSRLPEEGTT 93
.| :..|.:..:||||||:||||..|||.||.:...|..|:..||:||||
BL00084___nag 51 AEQLTFPENFKVLPGMIDVHIHGANGADVMDGTAEALQTMAEALPKEGTT 100
BSNT_05329___ 94 SFLATTITQEHGNISQALVNAREWKAAEESSLLG-AELLGIHLEGPFVSP 142
||||||:||:...|..||.|...:| |.....| ||:||:||||||:|.
BL00084___nag 101 SFLATTMTQDKATIEHALANVHRYK--EAGGRPGTAEVLGVHLEGPFISE 148
BSNT_05329___ 143 KRAGAQPKEWIRPSDVALFKKWQQEAGGLIKIVTLAPEEDQHFELIRHLK 192
||.||||.:.|...|::|||:||:.:|..||:||||||.:...|||..||
BL00084___nag 149 KRCGAQPPDDIIAPDLSLFKEWQRISGNNIKLVTLAPELEGSLELISFLK 198
BSNT_05329___ 193 DESIIASMGHTDADSALLSDAAKAGASHMTHLYNAMSPFHHREPGVIGTA 242
:..:|||.||:||....:....|||.||:|||:|.|...||||||..|:|
BL00084___nag 199 ETGVIASAGHSDAGLKEMEAGIKAGLSHVTHLFNGMRGLHHREPGTAGSA 248
BSNT_05329___ 243 LAHDGFVTELIADGIHSHPLAAKLAFLAKGSSKLILITDSMRAKGLKDGV 292
|.||....|:||||||.||...||||..|....:|||||:||||.||:|.
BL00084___nag 249 LLHDELKAEVIADGIHVHPAVIKLAFQQKQKEGIILITDAMRAKCLKNGT 298
BSNT_05329___ 293 YEFGGQSVTVRGRTALLSDGTLAGSILKMNEGARHMREFTNCSWTDIANI 342
|..|||.|.|:|..|:|.||||||||||||:.|.:|.:||.||..||..:
BL00084___nag 299 YTLGGQEVFVKGDKAVLRDGTLAGSILKMNQAALNMMDFTGCSLEDIVYM 348
BSNT_05329___ 343 TSANAAKQLGIFDRKGSVTVGKDADLVIVSSDCEVILTICRGNIAFISKE 392
|:.|.|:||.|:|||||:..||||||:|::...||::|:|:|.|||..:|
BL00084___nag 349 TAVNPARQLHIYDRKGSIRSGKDADLIILNEKNEVVMTLCKGVIAFSKRE 398
BSNT_05329___ 393 ADQI 396
...
BL00084___nag 399 VSP- 401
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