Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05332 and BL00086

See DNA alignment / Visit BSNT_05332 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:26
# Commandline: needle
#    -asequence pep-align/BSNT_05332___yvoA.1.5803.seq
#    -bsequence pep-align/BL00086___yvoA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05332___yvoA-BL00086___yvoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05332___yvoA-BL00086___yvoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05332___yvoA
# 2: BL00086___yvoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     120/244 (49.2%)
# Similarity:   171/244 (70.1%)
# Gaps:           2/244 ( 0.8%)
# Score: 604.0
# 
#
#=======================================

BSNT_05332___      1 MNINKQSPIPIYYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGISRMT     50
                      .|.|.|.|||||||..::|...:..:|:|...:|||||:||::.:||||
BL00086___yvo      1 -MIKKDSHIPIYYQIETEIKKLAETKDLKPGDLIPSEREFAEKYEVSRMT     49

BSNT_05332___     51 VRQALSNLVNEGLLYRLKGRGTFVSKPKMEQALQGLTSFTEDMKSRGMTP    100
                     ||||::||||||:|.|.:|:|||:::||:||.|:|||||:||||||||.|
BL00086___yvo     50 VRQAVNNLVNEGILVRQRGKGTFIAEPKIEQPLKGLTSFSEDMKSRGMRP     99

BSNT_05332___    101 GSRLIDYQLIDSTEELAAILGCGHPSSIHKITRVRLANDIPMAIESSHIP    150
                     |::::.:.:|...:..|..|.....:|::::.|:|||:|||||.|.|::|
BL00086___yvo    100 GTKMLGFGVIPCDQSTARKLEIREGASVYEVKRIRLADDIPMAYEISYLP    149

BSNT_05332___    151 FELAGELNESHFQSSIYDHIERYNSIPISRAKQELEPSAATTEEANILGI    200
                     .:....|.|....:|:||::|...|:.|.||.|.|||:.|:..|:..|.|
BL00086___yvo    150 ADFINGLTEDIMSASLYDYVENTLSLTIDRAAQTLEPAIASQAESEPLDI    199

BSNT_05332___    201 QKGAPVLLIKRTTYLQNGTAFEHAKSVYRGDRYTFVHYMDRLS-    243
                     ::|||||||:|.:||.:|..||..|||||||||.||..|.|.. 
BL00086___yvo    200 EEGAPVLLIERLSYLDDGRPFEVVKSVYRGDRYKFVIDMKRKDQ    243


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