Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06281 and BL00104

See DNA alignment / Visit BSNT_06281 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:14
# Commandline: needle
#    -asequence pep-align/BSNT_06281___soj.1.5803.seq
#    -bsequence pep-align/BL00104___soj.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06281___soj-BL00104___soj.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06281___soj-BL00104___soj.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06281___soj
# 2: BL00104___soj
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 262
# Identity:     238/262 (90.8%)
# Similarity:   250/262 (95.4%)
# Gaps:           9/262 ( 3.4%)
# Score: 1208.0
# 
#
#=======================================

BSNT_06281___      1 ---------MGKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDP     41
                              :||||||||||||||||||||||||||||||||||||||||
BL00104___soj      1 MFNVKVGDIVGKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDP     50

BSNT_06281___     42 QGNATSGLGIEKADVEQCVYDILVDDADVIDIIKATTVENLDVIPATIQL     91
                     |||||||:|:|||||:|||||||||||||.|:||.|:|||||||||||||
BL00104___soj     51 QGNATSGIGVEKADVDQCVYDILVDDADVKDVIKTTSVENLDVIPATIQL    100

BSNT_06281___     92 AGAEIELVPTISREVRLKRALEAVKQNYDYIIIDCPPSLGLLTINALTAS    141
                     ||||||||||||||||||||||:||||||::|||||||||||||||||||
BL00104___soj    101 AGAEIELVPTISREVRLKRALESVKQNYDFMIIDCPPSLGLLTINALTAS    150

BSNT_06281___    142 DSVVIPVQCEYYALEGLSQLLNTVRLVQKHLNTDLMIEGVLLTMLDARTN    191
                     ||||||||||||||||||||||:||||||||||||||:||||||||||||
BL00104___soj    151 DSVVIPVQCEYYALEGLSQLLNSVRLVQKHLNTDLMIDGVLLTMLDARTN    200

BSNT_06281___    192 LGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAEV    241
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL00104___soj    201 LGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAEV    250

BSNT_06281___    242 YLDLAKEVAANG    253
                     ||:||||||||.
BL00104___soj    251 YLELAKEVAANA    262


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