Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03933 and BL00125
See
DNA alignment /
Visit
BSNT_03933 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:57
# Commandline: needle
# -asequence pep-align/BSNT_03933.1.5803.seq
# -bsequence pep-align/BL00125___yrhL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03933-BL00125___yrhL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03933-BL00125___yrhL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03933
# 2: BL00125___yrhL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 635
# Identity: 246/635 (38.7%)
# Similarity: 303/635 (47.7%)
# Gaps: 248/635 (39.1%)
# Score: 1289.0
#
#
#=======================================
BSNT_03933 0 -------------------------------------------------- 0
BL00125___yrh 1 MRDQTQQHRYIPGLDGLRAFAVLAVIAYHLNMSWADGGFIGVDIFFVLSG 50
BSNT_03933 0 -------------------------------------------------- 0
BL00125___yrh 51 YLITSIILPAYGNDISLTFRDFWVRRIRRLLPAATLMIFATVIWVALFNR 100
BSNT_03933 0 -------------------------------------------------- 0
BL00125___yrh 101 ELMHTVRGDAISSLLYVSNWWFIFHDLSYFDSFGSPSPLKNLWSLAIEEQ 150
BSNT_03933 0 -------------------------------------------------- 0
BL00125___yrh 151 FYFIWPIILLLGIYIFKKRERFAAAVVLCALCSAIWMSILYVPGGDPSRV 200
BSNT_03933 1 --------------------------------------MHATEFSAFCIL 12
:|.||.:||.:|
BL00125___yrh 201 YYGTDTRAFELLIGCALALVWPMKRLSGNRLPNSLKHALHGTELAAFALL 250
BSNT_03933 13 VLCVYFTDEYEPFLYRGGMLFISVTAAILIACVCHPSSFLGNLLSWRPLR 62
::|:||.||:.||||.||||.||:.||||||||.|||||||..||.:|||
BL00125___yrh 251 MMCIYFVDEFSPFLYHGGMLIISIIAAILIACVSHPSSFLGFALSVKPLR 300
BSNT_03933 63 WLGARSYGIYLWHYPVIVLSTPVQEIGNPVFWHIVLKVIVTCILAELSYL 112
|:|.||||||||||||||||||||||||||:||:.:||.||.|||||||.
BL00125___yrh 301 WIGKRSYGIYLWHYPVIVLSTPVQEIGNPVYWHVAMKVAVTFILAELSYR 350
BSNT_03933 113 FIEKPVRTQGFRPFFRRVLIHRIKEWKTTSVISKMSIGFIIFAILIFAGG 162
|||||:|..||:||..||.:.:|.||||.||.||:|||.:..|:|:||||
BL00125___yrh 351 FIEKPIRKDGFKPFVSRVFLDKITEWKTASVPSKISIGLMFAALLVFAGG 400
BSNT_03933 163 LSGLAGEQKHPTK-WTYSSQETNADTSQASGDKKNAAADKKHNPEQKTTD 211
|||||.|:|.|.: ::.|.:||:|...|.:...:....|||...|
BL00125___yrh 401 LSGLADEKKQPQQAYSKSYEETSASADQPADKSEERQDDKKAQTE----- 445
BSNT_03933 212 SIQGQKENKDSGQETHKKKDTQSQQTKEPADTAKEVLAIGDSVMLDISSH 261
.|.:....:|:|:...||.||.: |||....|||||:||||||||:|.
BL00125___yrh 446 --SGNESKTGNGEESSDTKDEQSAE-KEPDRIEKEVLAVGDSVMLDIASS 492
BSNT_03933 262 LRQSLSHVTIDGKVGRQMSQALELAREYKSFNQPNKAVIIELGTNGYFTN 311
||:.:..:||||:||||:.:||:|...|.|||.|:|||:||||||||||:
BL00125___yrh 493 LRRKIPGITIDGQVGRQVREALQLTSTYASFNHPDKAVVIELGTNGYFTD 542
BSNT_03933 312 SQIEQLLQSFSKAHIYLVNTRVPRQWESKVNESLQQQAHAHQNVTLVDWH 361
.|::.||.:||||.:|||||||||||||||||||::.|.:.|||||||||
BL00125___yrh 543 GQLDALLDAFSKADVYLVNTRVPRQWESKVNESLRKHADSRQNVTLVDWH 592
BSNT_03933 362 TEALQHPEYFTPDGVHLVPKGAKTLTALIVQAMKS 396
.||||||||||.|||||:||||:.|.:|||:|||
BL00125___yrh 593 AEALQHPEYFTADGVHLMPKGAEALASLIVKAMK- 626
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.