Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06221 and BL00176
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:11
# Commandline: needle
# -asequence pep-align/BSNT_06221___yycA.1.5803.seq
# -bsequence pep-align/BL00176___yycA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06221___yycA-BL00176___yycA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06221___yycA-BL00176___yycA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06221___yycA
# 2: BL00176___yycA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 712
# Identity: 524/712 (73.6%)
# Similarity: 591/712 (83.0%)
# Gaps: 47/712 ( 6.6%)
# Score: 2679.0
#
#
#=======================================
BSNT_06221___ 1 --MKTKRFDAALILILLAAAFLNTYHIWQDDTANQYYLAAVKSMTQSFHN 48
:|.|:.|..|:||||||..||||:||.||.||||||||||||||||||
BL00176___yyc 1 MKIKNKQLDVILVLILLAALILNTYNIWLDDAANQYYLAAVKSMTQSFHN 50
BSNT_06221___ 49 FFYASFDPSGFVTVDKPPVVLWIQTIFALIFGVHTWSVIIPQALAGVGSV 98
||:||||.||||:|||||||||||||||.||||||||||:||||||.||:
BL00176___yyc 51 FFFASFDSSGFVSVDKPPVVLWIQTIFAKIFGVHTWSVILPQALAGAGSI 100
BSNT_06221___ 99 FLLYRVIKPTFGIGAARISALVMALTPIAVAVSRTNNIDSMLVFTILLGS 148
:|||.:|||.||.||||||||||||||||||||||||||||||||:|||:
BL00176___yyc 101 YLLYALIKPKFGKGAARISALVMALTPIAVAVSRTNNIDSMLVFTLLLGT 150
BSNT_06221___ 149 ACLFRAVKQGKLVWLLTAFALIGLAFNMKMMQAFMVLPAFVLFYLVAYRV 198
.||.:|||||:|:|||.||.||||.|||||.|||||||||:||||:|...
BL00176___yyc 151 WCLMKAVKQGRLIWLLAAFGLIGLGFNMKMFQAFMVLPAFLLFYLIAAHA 200
BSNT_06221___ 199 SLKKKIGSLLLSLVLLTGLSLSWAIAVDSASSSSRPYVGSSQTNSVLELA 248
:.||||.|.:|||::|||:|||||:|||..|:.|||||||||||||||||
BL00176___yyc 201 NWKKKIVSAVLSLIVLTGISLSWALAVDYTSADSRPYVGSSQTNSVLELA 250
BSNT_06221___ 249 FGYNGTERLLGQTTGLAKGDMNAAGGGKMQNQDNMQAPNGNGSSFSQNGN 298
|||||||||||||||.|:||||..|| :||.||||.. :||||
BL00176___yyc 251 FGYNGTERLLGQTTGNARGDMNGFGG-------DMQQPNGNAQ--AQNGN 291
BSNT_06221___ 299 QSFGNHSHAPQPSNGQTGAL----------------NGGGGTPPTGGNGP 332
:|.|. ||||.||: |||...|..||.|.
BL00176___yyc 292 RSSGG-------SNGQNGAMQPPGAGGSADGSSQGANGGSQQPAGGGPGG 334
BSNT_06221___ 333 GNGGPGG--------GGGKSVNMFGTGDPGPLRLFQSALSGQISWMLPFS 374
||||||| |||:|:|||||||.||||||||||||||||||||:
BL00176___yyc 335 GNGGPGGNGGPGGGQGGGQSMNMFGTGDAGPLRLFQSALSGQISWMLPFA 384
BSNT_06221___ 375 LIGLLGAIVSWYRDRRGHAAEMKETLFWAAWLVPVAGFFSIAGFFHQYYL 424
|:||||.|::|:|.||..|.|||||:||:|||||||||||||||||.|||
BL00176___yyc 385 LLGLLGTIITWFRGRREKAGEMKETIFWSAWLVPVAGFFSIAGFFHHYYL 434
BSNT_06221___ 425 IMLAPPIAALSGIGWYTMHRLYKNNKDWSSYLLPAAVLITAAFQVYILSA 474
||:|||||||||||||.|:.||.|:|||:|||||||||.|||||||||||
BL00176___yyc 435 IMMAPPIAALSGIGWYAMYGLYNNHKDWASYLLPAAVLTTAAFQVYILSA 484
BSNT_06221___ 475 YTSQIGSVWMYVLGLLGLGITLALLMLKRSHPFSKQLTIISLCVLLLTPV 524
||:||||.||||:|:||||:|:|||||||.|||.||||||||||||||||
BL00176___yyc 485 YTNQIGSAWMYVMGILGLGVTIALLMLKRRHPFGKQLTIISLCVLLLTPV 534
BSNT_06221___ 525 YWSATPLLYGGNSVLPESGPQLKGSANGGNMFSSEVDSGLLSYLRKHNTG 574
||||||:|||||||||||||||: |:|||.||||:||:|||:|||::|||
BL00176___yyc 535 YWSATPILYGGNSVLPESGPQLQ-SSNGGGMFSSDVDTGLLTYLRENNTG 583
BSNT_06221___ 575 EEYLFATLTTVTAAPYIIYENESVMAMGGFNGTDPILTVSELKKLIKEGK 624
||||||||||||||.|||..:|:|||:||||||||||:|||||.|||:|:
BL00176___yyc 584 EEYLFATLTTVTAATYIINADENVMALGGFNGTDPILSVSELKNLIKKGR 633
BSNT_06221___ 625 VKYFLLSENNSGNSELVSWIKKNGKEITSDEYSGSSSSTNSVQGMRGGPG 674
|||||:|| ||||||||||||:||.||:||:||.:.|... ||.|||||
BL00176___yyc 634 VKYFLISE-NSGNSELVSWIKENGTEISSDQYSSTDSFAQ--QGARGGPG 680
BSNT_06221___ 675 GESQQTLYLVE- 685
|..:||||.||
BL00176___yyc 681 GGQRQTLYKVEL 692
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