Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03914 and BL00300

See DNA alignment / Visit BSNT_03914 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:55
# Commandline: needle
#    -asequence pep-align/BSNT_03914___yraB.1.5803.seq
#    -bsequence pep-align/BL00300___yraB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03914___yraB-BL00300___yraB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03914___yraB-BL00300___yraB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03914___yraB
# 2: BL00300___yraB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:      48/143 (33.6%)
# Similarity:    82/143 (57.3%)
# Gaps:          15/143 (10.5%)
# Score: 252.0
# 
#
#=======================================

BSNT_03914___      1 --MNIAQVAKQFGLTAATLRYYERVGLIPPVKRKNSGIRDYDEEDIKWIE     48
                       .:|.:||::.||...||||||:.||:|.:||..:|.|.::|:|:.|:|
BL00300___yra      1 MGYSIKEVAEKVGLPTHTLRYYEKEGLLPFIKRDANGNRIFEEKDLSWLE     50

BSNT_03914___     49 FIKCMRNAGLSIEALIEYTTLFTEGDRTVEARKNILADERQRLIEKRKEI     98
                     .:.|:|...:::..|.|...|..|||.|:..||.||...:::::||::.:
BL00300___yra     51 LVICLRKTDIALSELREIVNLTKEGDWTISKRKQILEKHKEKMLEKQRVL    100

BSNT_03914___     99 DETIKRLDTKIKDYDGKLRENEA-KLKSRPKTESLHGSVEQRR    140
                     :....::|.||..|||..::|:| .||:..|            
BL00300___yra    101 ERAFLKIDEKIMYYDGLEKKNQAMSLKADEK------------    131


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