Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04168 and BL00331

See DNA alignment / Visit BSNT_04168 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:14
# Commandline: needle
#    -asequence pep-align/BSNT_04168___lcfA.1.5803.seq
#    -bsequence pep-align/BL00331___lcfA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04168___lcfA-BL00331___lcfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04168___lcfA-BL00331___lcfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04168___lcfA
# 2: BL00331___lcfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 568
# Identity:     384/568 (67.6%)
# Similarity:   453/568 (79.8%)
# Gaps:          17/568 ( 3.0%)
# Score: 2069.5
# 
#
#=======================================

BSNT_04168___      1 MQSQKPWLAEYPNDIPHELPLPNKTLQSILTDSAARFPDKTAISFYGKKL     50
                     |.::||||..||..|||||...::||.|||..||.:|.:||||.|.|||.
BL00331___lcf      1 MPTEKPWLRHYPEQIPHELQFEDQTLHSILQQSAQQFSEKTAIHFLGKKR     50

BSNT_04168___     51 TFHDILTDALKLAAFLQGNGLQKGDRVAVMLPNCPQTVISYYGVLFAGGI    100
                     ::.::..||||:|.:|...|:||||||::|||||||.||:||||||:|||
BL00331___lcf     51 SYREVYEDALKMADYLLSLGIQKGDRVSIMLPNCPQAVIAYYGVLFSGGI    100

BSNT_04168___    101 VVQTNPLYTEHELEYQLRDAQVSVIITLDLLFPKAIKMKTLSIVDQILIT    150
                     ||||||||||.|||:.|.|:..::|||||:|:|.|.|||.|:.:..|:.|
BL00331___lcf    101 VVQTNPLYTERELEHLLHDSGATIIITLDMLYPAAYKMKALTSIRHIIAT    150

BSNT_04168___    151 SVKDYLPFPKNILYPLTQKQ--KVHIDFDKTANIHTFASSMKQEKTELLT    198
                     |:|||||||||:|||:.||:  ::.::.::....|.|.:.||:      .
BL00331___lcf    151 SIKDYLPFPKNLLYPIVQKKENQMSVEINENETTHLFRTIMKR------P    194

BSNT_04168___    199 IP------KIDPEHDIAVLQYTGGTTGAPKGVMLTHQNILANTEMCAAWM    242
                     :|      :|||.||||||||||||||.||||||:|:|||||.||||||.
BL00331___lcf    195 VPSGPPGIEIDPAHDIAVLQYTGGTTGTPKGVMLSHRNILANMEMCAAWF    244

BSNT_04168___    243 YDVKEGAEKVLGIVPFFHVYGLTAVMNYSIKLGFEMILLPKFDPLETLKI    292
                     |.:.:|.||||||||||||||:|||:|::|:.|:||||||:||....||.
BL00331___lcf    245 YQLNKGEEKVLGIVPFFHVYGMTAVLNFTIRQGYEMILLPRFDARAALKT    294

BSNT_04168___    293 IDKHKPTLFPGAPTIYIGLLHHPELQHYDLSSIKSCLSGSAALPVEVKQK    342
                     |||.|||:|||||||||.||:||:|..||||||||||||||||||||||:
BL00331___lcf    295 IDKEKPTIFPGAPTIYIALLNHPDLHQYDLSSIKSCLSGSAALPVEVKQQ    344

BSNT_04168___    343 FEKVTGGKLVEGYGLSEASPVTHANFIWGKNKPGSIGCPWPSTDAAIYSE    392
                     |||||||:||||||:||.||||||||||..||.||||||||.||||||||
BL00331___lcf    345 FEKVTGGRLVEGYGMSETSPVTHANFIWDLNKAGSIGCPWPGTDAAIYSE    394

BSNT_04168___    393 ETGELAAPYEHGEIIVKGPQVMKGYWNKPEETAAVLRDGWLFTGDMGYMD    442
                     |||....|||||||.||||||||||||..||||..|||||.||||:||||
BL00331___lcf    395 ETGGFLGPYEHGEIAVKGPQVMKGYWNNDEETAQSLRDGWFFTGDIGYMD    444

BSNT_04168___    443 EEGFFYIADRKKDIIIAGGYNIYPREVEEALYEHEAIQEIVVAGVPDSYR    492
                     ::|||||.|||||:||||||||||||:||.||||||:||.||||:||.||
BL00331___lcf    445 KDGFFYIVDRKKDVIIAGGYNIYPREIEEVLYEHEAVQEAVVAGIPDEYR    494

BSNT_04168___    493 GETVKAFVVLKKGAKADAEELDAFARSRLAPYKVPKAYDFRKELPKTAVG    542
                     |||||||||||.......:|||.:||||||||||||.|:||.||||||||
BL00331___lcf    495 GETVKAFVVLKDHVTITEKELDEYARSRLAPYKVPKVYEFRDELPKTAVG    544

BSNT_04168___    543 KILRRRLLEEETENHHIK    560
                     |||||.|::||....   
BL00331___lcf    545 KILRRALVQEEKTGV---    559


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04168 and BL00331

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
