Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04181 and BL00342

See DNA alignment / Visit BSNT_04181 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:16
# Commandline: needle
#    -asequence pep-align/BSNT_04181___ysgA.1.5803.seq
#    -bsequence pep-align/BL00342___ysgA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04181___ysgA-BL00342___ysgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04181___ysgA-BL00342___ysgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04181___ysgA
# 2: BL00342___ysgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 248
# Identity:     172/248 (69.4%)
# Similarity:   205/248 (82.7%)
# Gaps:           0/248 ( 0.0%)
# Score: 909.0
# 
#
#=======================================

BSNT_04181___      1 MKQIESAKNQKVKDWKKLHTKKERTKTNTFLIEGEHLVEEALKSPGIVKE     50
                     ||:||||||||||||||||.|||||||||||||||||||||||:||:|||
BL00342___ysg      1 MKRIESAKNQKVKDWKKLHAKKERTKTNTFLIEGEHLVEEALKTPGVVKE     50

BSNT_04181___     51 ILVKDETRIPSDLETGIQCYMLSEDAFSAVTETETPQQIAAVCHMPEEKL    100
                     |:|.||...|:.::..:..|:||.|||||:.||||||.:||||.|||...
BL00342___ysg     51 IMVADEADFPAMIDESVARYVLSADAFSAIAETETPQAVAAVCRMPESGP    100

BSNT_04181___    101 ATARKVLLIDAVQDPGNLGTMIRTADAAGLDAVVLGDGTADAFNGKTLRS    150
                     ....|:||.|||||||||||:||||||||:||||:|.||.|.:|.|||||
BL00342___ysg    101 FQYEKLLLADAVQDPGNLGTIIRTADAAGIDAVVIGQGTVDPYNAKTLRS    150

BSNT_04181___    151 AQGSHFHIPVVRRNLPSYVDELKAEGVKVYGTALQNGAPYQEIPQSESFA    200
                     |||||||||:::|.|...::|||.:.|.|||||||...|::|...|:|||
BL00342___ysg    151 AQGSHFHIPILKRELSELIEELKGKSVPVYGTALQGAVPFREAEPSQSFA    200

BSNT_04181___    201 LIVGNEGAGVDAALLEKTDLNLYVPLYGQAESLNVAVAAAILVYHLRG    248
                     |::||||:|||.|||.:||.|||||:||:|||||||.|||:|:|||||
BL00342___ysg    201 LLIGNEGSGVDPALLAQTDQNLYVPIYGKAESLNVAAAAAVLLYHLRG    248


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